Gene
| Gene Model ID | pfu_aug1.0_3094.1_30342 |
|---|---|
| Locus | scaffold3094.1 : 87186 ... 91902 : + |
| To GenomeBrowser | scaffold3094.1:87186..91902 |
| Genes list of scaffold | scaffold3094.1 |
| Synonym | pfu_aug2.0_3100.1_02326 |
Manual annotation
| Study field | 20 basic cell biology |
|---|---|
| Gene name | argonaute-like |
| Description | NCBI blastP top hit to Branchiostoma floridae hypothetical protein BRAFLDRAFT_126413 [XP_002611939.1] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3094.1_30342.t1 | 1 | 1 | Piwi | 236 | 327 | 6.7e-39 | 133.6 | 5.60519e-43 | 8.3e-39 | 133.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3094.1_30342.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30342.t1 atggttgtagagcttaacacgttactactcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaatctcgccaacccaccc cctggtaccgttattgacactgtagtcaccaaaccggagtggtacgatttcttcctcgtgtcccagtctgtacgtcaggg tacggtaacgcccactcactacaatgttatctgggatacatcgggactgaagccagatcacatgcagagattggcctaca agctgtgtcatctgtactacaactggccgggaaccatccgggtacctgcaccgtgccaatatgcacataaacttgccttc ttggtcggtcagtccattcacaaggatccatccttagctctgtgtgacaggttgtatttcctatag |
|
Protein
| Protein ID | pfu_aug1.0_3094.1_30342.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30342.t1 MVVELNTLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLANPP PGTVIDTVVTKPEWYDFFLVSQSVRQGTVTPTHYNVIWDTSGLKPDHMQRLAYKLCHLYYNWPGTIRVPAPCQYAHKLAF LVGQSIHKDPSLALCDRLYFL |
|