Gene
| Gene Model ID | pfu_aug1.0_30979.1_62633 |
|---|---|
| Locus | scaffold30979.1 : 1 ... 33085 : - |
| To GenomeBrowser | scaffold30979.1:1..33085 |
| Genes list of scaffold | scaffold30979.1 |
| Synonym | pfu_aug2.0_408.1_27357 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30979.1_62633.t1 | 2 | 1 | EphA2_TM | 99 | 137 | 4.6e-07 | 30.1 | 0.00019 | 0.23 | 11.8 |
| pfu_aug1.0_30979.1_62633.t1 | 2 | 2 | EphA2_TM | 184 | 246 | 4.6e-07 | 30.1 | 8.7e-06 | 0.011 | 16.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_30979.1_62633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30979.1_62633.t1 atggtatattcataccttatgaaggcattgagttttaaaagtactttgaacagctgcaaccgagatacggagatacatat tcgtcttatcatcataaaaatgtggacaccaaatcagacatacacaaaagatgattatccagacagattttgtgctggcc aagaccaatatcttgatgtagagatcgaggccgatgcttcctcggggttttcgcggattgatacatccagctcgtacttc acattgagaattaccgctactaaaacattcgattatggcggcactgtcggagctatagtgggaggagtgataggagggct tgcgtttctcggtgttgctataacagtgtgtattgtcatcgcatgccggagaaagagatatgccggacaagtgaatcgac ccacaaccacatctatggttaatcaagacatagaagagacaaatatggtattacaacgttcttggctagctattttactt ctatattcaatctattgtgtagattttataattggatacgaagaaacgaatggcggtaatgtcggagctatagttggagg tgtgataggagggcttgcgtttctcggtattgtaataacagtgtgtattgtcatcgcatgtcggagaaaaggatatgccg gacaagtgaatcaacccacaactacaaccatggtaaatcaaggtggaagccaaagtgccgcatatccccagcaaacatac gggcagcctggggcttacccacaacaacagatggcgtatcccccgcccatgggctacacccagcccggtaactacccggt acaagggtacggcttctctggacagcaataccagcaacctcctcctcctcctgctcaggcaccaaatacaagtgccccgc ccccttcctatagcgacgtcgcaaaattctcgtga |
|
Protein
| Protein ID | pfu_aug1.0_30979.1_62633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30979.1_62633.t1 MVYSYLMKALSFKSTLNSCNRDTEIHIRLIIIKMWTPNQTYTKDDYPDRFCAGQDQYLDVEIEADASSGFSRIDTSSSYF TLRITATKTFDYGGTVGAIVGGVIGGLAFLGVAITVCIVIACRRKRYAGQVNRPTTTSMVNQDIEETNMVLQRSWLAILL LYSIYCVDFIIGYEETNGGNVGAIVGGVIGGLAFLGIVITVCIVIACRRKGYAGQVNQPTTTTMVNQGGSQSAAYPQQTY GQPGAYPQQQMAYPPPMGYTQPGNYPVQGYGFSGQQYQQPPPPPAQAPNTSAPPPSYSDVAKFS |
|