Gene
| Gene Model ID | pfu_aug1.0_3104.1_01334 |
|---|---|
| Locus | scaffold3104.1 : 13869 ... 48245 : - |
| To GenomeBrowser | scaffold3104.1:13869..48245 |
| Genes list of scaffold | scaffold3104.1 |
| Synonym | pfu_aug2.0_495.1_17485 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3104.1_01334.t1 | 1 | 1 | 7TM_GPCR_Srsx | 194 | 241 | 9.5e-06 | 24.9 | 3.1e-09 | 1.5e-05 | 24.2 |
| pfu_aug1.0_3104.1_01334.t1 | 1 | 1 | 7tm_1 | 199 | 263 | 1.4e-16 | 60.4 | 5.0e-20 | 2.5e-16 | 59.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3104.1_01334.t1 | gi|328704431|ref|XP_001952361.2| | 8.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3104.1_01334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3104.1_01334.t1 atgggcaaccgcacaaaatcgataattcagaaaatcagaaaccgattatgtgataagcaatcgggaattaagaaatcgtt gacttacggagagagaactcaatcaggggtatataagatcctgacgataatctcaacagcactaacaatagagcacaaaa ttgagcatcgacggaaccctggctacttctgtagaactcatcgactgcaaatgtcactggtgagcttatacagtccctac gacttgaacagcagaaaatataacacaatgtccagaatgttggagaaagtcgacactattggaattcaccaaattggcta catttatgacacgaatttgaccagttcgacagatttgaccttgtatccagtgtttattaatgaagccttgaaacttgtgc cttgtcctgatgagatcaaagattttaaggtgtgtgagaaagtttgctggctcttgatcgacaacactacacaatgtaat ctcaccgcaaatccagccagaaacgaggattaccttgaaaacctgcgatttgagagggtggttcggtaccttgtccctgt actttttggcataattgtgctgctgggattggtcgggaacattctagtcatcacggtcgtctggtccaacaaacagatgc agaacacgactaacatactaatagtcagtctagcacttgctgacctcttgttcatcacattctgcgtaccattcacagca gtatcgtatgcctcgacggatgatatctttggaaatgtgtggtgtaagatagcttcttacatgatatacggggaacgtca ggatgatcaaccctttggcatttcatgtttcattatatttccaataagaaaatactttttgacttga |
|
Protein
| Protein ID | pfu_aug1.0_3104.1_01334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3104.1_01334.t1 MGNRTKSIIQKIRNRLCDKQSGIKKSLTYGERTQSGVYKILTIISTALTIEHKIEHRRNPGYFCRTHRLQMSLVSLYSPY DLNSRKYNTMSRMLEKVDTIGIHQIGYIYDTNLTSSTDLTLYPVFINEALKLVPCPDEIKDFKVCEKVCWLLIDNTTQCN LTANPARNEDYLENLRFERVVRYLVPVLFGIIVLLGLVGNILVITVVWSNKQMQNTTNILIVSLALADLLFITFCVPFTA VSYASTDDIFGNVWCKIASYMIYGERQDDQPFGISCFIIFPIRKYFLT |
|