Gene
| Gene Model ID | pfu_aug1.0_3113.1_23182 |
|---|---|
| Locus | scaffold3113.1 : 16146 ... 19957 : + |
| To GenomeBrowser | scaffold3113.1:16146..19957 |
| Genes list of scaffold | scaffold3113.1 |
| Synonym | pfu_aug2.0_472.1_07564 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3113.1_23182.t1 | 1 | 1 | Usp | 5 | 145 | 7.0e-28 | 97.5 | 1.1e-31 | 8.4e-28 | 97.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3113.1_23182.t1 | gi|156394391|ref|XP_001636809.1| | predicted protein [Nematostella vectensis] | 3.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3113.1_23182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3113.1_23182.t1 atggcggagggcagagtagttgtgattgctcttgatggaagtgaatactcaaactatgcctttgattggtacatgaagca tgttcataaagattcagacaaggtgatcactgtccattgtcccgaattccatcaagttgtacatggaccttacgtagatg cagcagggttgcagcttctttacgaggaagaaaagaagaaaattgacaaaaccattgaatcccttggacaaaaaatgaag gatcatggcctggtgggaaaagttcggagtatcggtggaaatccaggcgaagtcatttgtcgtgtagcgacggaggagaa ggctggtctaatcataaccggaactcgtggtatggggaccatgcgtagaacgtttcttggcagcgtgagtgattacgtag tgcaccattcccatattccagtcttggtcacgagacatcgggatcatcacgaagcccttggacatagcagtcactag |
|
Protein
| Protein ID | pfu_aug1.0_3113.1_23182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3113.1_23182.t1 MAEGRVVVIALDGSEYSNYAFDWYMKHVHKDSDKVITVHCPEFHQVVHGPYVDAAGLQLLYEEEKKKIDKTIESLGQKMK DHGLVGKVRSIGGNPGEVICRVATEEKAGLIITGTRGMGTMRRTFLGSVSDYVVHHSHIPVLVTRHRDHHEALGHSSH |
|