Gene
| Gene Model ID | pfu_aug1.0_3113.1_23185 |
|---|---|
| Locus | scaffold3113.1 : 86796 ... 98673 : - |
| To GenomeBrowser | scaffold3113.1:86796..98673 |
| Genes list of scaffold | scaffold3113.1 |
| Synonym | pfu_aug2.0_244.1_13862 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3113.1_23185.t1 | 1 | 1 | Cupin_8 | 3 | 166 | 4.3e-22 | 78.8 | 6.8e-26 | 5.0e-22 | 78.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3113.1_23185.t1 | gi|126326481|ref|XP_001370058.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3113.1_23185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3113.1_23185.t1 agaattccaacagtgcttcaaggattagacattggttcttgtgttcagaagtggagttctctggaatatctgatgaaaaa tggaggaaacaagcaagtcaaaatccatgtgtcagaatcacctcagatggattttatcaacaaaaactttgtttacaggt cacttccatttgatgatttcgtgagaagagcatctgaaaagacccactcagaatacttcatatcagaaacagaaaattac taccttcgagcccttggagatgacccccggagagagatagctgacatacactcccagttccccacccttgcacaagatgt caaatttcctgaccttttccccagggagaaatttttctccagcgtatttaggatagcatcagagggacttcagctctgga cacattatgatattatggacaatttcctgatgcaaataagtgggaggaagaaggttgtattatttagtcctgatgatgtg aactacttgtatcttaatggatatgctataaaagcgcataagtga |
|
Protein
| Protein ID | pfu_aug1.0_3113.1_23185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3113.1_23185.t1 RIPTVLQGLDIGSCVQKWSSLEYLMKNGGNKQVKIHVSESPQMDFINKNFVYRSLPFDDFVRRASEKTHSEYFISETENY YLRALGDDPRREIADIHSQFPTLAQDVKFPDLFPREKFFSSVFRIASEGLQLWTHYDIMDNFLMQISGRKKVVLFSPDDV NYLYLNGYAIKAHK |
|