Gene
| Gene Model ID | pfu_aug1.0_3114.1_37508 |
|---|---|
| Locus | scaffold3114.1 : 40896 ... 49086 : + |
| To GenomeBrowser | scaffold3114.1:40896..49086 |
| Genes list of scaffold | scaffold3114.1 |
| Synonym | pfu_aug2.0_46.1_20116 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3114.1_37508.t1 | 8 | 1 | SHIPPO-rpt | 28 | 51 | 4.4e-14 | 52.5 | 1.4e-06 | 0.021 | 15.7 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 2 | SHIPPO-rpt | 63 | 75 | 4.4e-14 | 52.5 | 0.027 | 400.0 | 2.1 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 3 | SHIPPO-rpt | 96 | 109 | 4.4e-14 | 52.5 | 0.28 | 4200.0 | -1.1 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 4 | SHIPPO-rpt | 128 | 153 | 4.4e-14 | 52.5 | 0.00036 | 5.4 | 8.0 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 5 | SHIPPO-rpt | 172 | 196 | 4.4e-14 | 52.5 | 3.7e-06 | 0.055 | 14.3 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 6 | SHIPPO-rpt | 204 | 228 | 4.4e-14 | 52.5 | 7.8e-06 | 0.12 | 13.3 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 7 | SHIPPO-rpt | 237 | 262 | 4.4e-14 | 52.5 | 5.9e-06 | 0.088 | 13.7 |
| pfu_aug1.0_3114.1_37508.t1 | 8 | 8 | SHIPPO-rpt | 269 | 283 | 4.4e-14 | 52.5 | 0.0052 | 77.0 | 4.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3114.1_37508.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3114.1_37508.t1 atgacgtcaaagtttccttacctaaatacagcactcatttctttgcccatggctagtcacatgacctcttatttcacatc cggtcccgcagattacgatctaaacacaagtagaagaggtccttcatactcatttggaacaaaactcccgccaccaccgg ctgtacagagaacggtgaacaaggacagtccatcgcctaatacctataatatcggcaccactatcggtagaaccacatca gttgtcattggggaacgtgcgcccgaaccaaaaccaaaattagatagcccatccccagcggcatactttacaagggatat catgaaaaataaaagagcgacaacgctagcctaccgctggttcgataccgatgagccagcacatccgggtccggcagact ataccatcaccaaggctaatctcacaaggactccgatgttctcaaacaggcagaagaccaacccttcatatccggattca ctcaactacactcccagagatgtagacgaacgtcctgggccaggtgaatatgatgtgactaaaacgttcgacaataatga tgctccagcgtataaaatagcacagaaactgaataaccgcacttctgataatccggctccaaatgcttacgaatatgaga agagatcccaaaaagatgcgcctgcattctccatgggcaaaagatttgaaataccagatagtagagtgagtccaggaccg gcgtcgtatacccctcaaaaacaagacagcaataatcccaagtactctatgacgtcccgacccacacaggaaacgaagag aggaaatcctgcacctaatgcctacaacttacagaatgcaggaaaatgcaaacaaaataatacaggaatatcacttaaaa gtcgggcaagtccgtacgtctacagcgggttccataccaataagattagtgacgagattgcaccgctttacgtcgcctct aatatctaa |
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Protein
| Protein ID | pfu_aug1.0_3114.1_37508.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3114.1_37508.t1 MTSKFPYLNTALISLPMASHMTSYFTSGPADYDLNTSRRGPSYSFGTKLPPPPAVQRTVNKDSPSPNTYNIGTTIGRTTS VVIGERAPEPKPKLDSPSPAAYFTRDIMKNKRATTLAYRWFDTDEPAHPGPADYTITKANLTRTPMFSNRQKTNPSYPDS LNYTPRDVDERPGPGEYDVTKTFDNNDAPAYKIAQKLNNRTSDNPAPNAYEYEKRSQKDAPAFSMGKRFEIPDSRVSPGP ASYTPQKQDSNNPKYSMTSRPTQETKRGNPAPNAYNLQNAGKCKQNNTGISLKSRASPYVYSGFHTNKISDEIAPLYVAS NI |
|