Gene
| Gene Model ID | pfu_aug1.0_31278.1_55379 |
|---|---|
| Locus | scaffold31278.1 : 3106 ... 6788 : + |
| To GenomeBrowser | scaffold31278.1:3106..6788 |
| Genes list of scaffold | scaffold31278.1 |
| Synonym | pfu_aug2.0_540.1_00858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_31278.1_55379.t1 | 1 | 1 | RRM_6 | 6 | 65 | 3.9e-10 | 39.5 | 1.6e-13 | 5.9e-10 | 38.9 |
| pfu_aug1.0_31278.1_55379.t1 | 1 | 1 | RRM_1 | 6 | 55 | 1.4e-10 | 40.6 | 6.7e-14 | 2.5e-10 | 39.8 |
| pfu_aug1.0_31278.1_55379.t1 | 1 | 1 | RRM_5 | 20 | 71 | 1.2e-06 | 28.3 | 6.1e-10 | 2.3e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_31278.1_55379.t1 | gi|345490453|ref|XP_001602436.2| | PREDICTED: TAR DNA-binding protein 43 isoform X2 [Nasonia vitripennis] | 8.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_31278.1_55379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_31278.1_55379.t1 atgataagtcgtaaagtgttcattgccagatgtacagaggatataacggcagatgaccttcgtcaatatttctctaagtt tggggaggttgtagatgtgttcatacccagacccttcagggcttttgcttttgtcacattctctgatcctaaggttgcaa gggccctttgtggggaggaccacattattaaaggtgccagtgttcacgttaccacagcagctcccaaaaactctgataag agtgataacagagggaatgggggaggtggatcatactccagaatggctcatggtggtgggaggggacccccaactcaggg agggtggaaccagggtaaaccaatagcaacagtagctactgtacagcctgttcctgaccctaacctagccaatcagtttg gtatgaatctctttaattctgcaatgttggctgccgcacaagctgtcctacaaggtcaaggtcagatacctgccccccaa cagcaacctgtcgcccaaggtcattctgatccctttgcagcacagaacaaccgagcattcgacacgagcagacagaatca aggcttcttctccggaggtacgcagtggggagctaacgatacaagtaatactgcaggtgggtatgcaagctggggtggag gcagtcagcaacaaagtgggtggagctaa |
|
Protein
| Protein ID | pfu_aug1.0_31278.1_55379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_31278.1_55379.t1 MISRKVFIARCTEDITADDLRQYFSKFGEVVDVFIPRPFRAFAFVTFSDPKVARALCGEDHIIKGASVHVTTAAPKNSDK SDNRGNGGGGSYSRMAHGGGRGPPTQGGWNQGKPIATVATVQPVPDPNLANQFGMNLFNSAMLAAAQAVLQGQGQIPAPQ QQPVAQGHSDPFAAQNNRAFDTSRQNQGFFSGGTQWGANDTSNTAGGYASWGGGSQQQSGWS |
|