Gene
| Gene Model ID | pfu_aug1.0_3134.1_59148 |
|---|---|
| Locus | scaffold3134.1 : 15417 ... 26405 : - |
| To GenomeBrowser | scaffold3134.1:15417..26405 |
| Genes list of scaffold | scaffold3134.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3134.1_59148.t1 | 2 | 1 | zf-C2H2 | 22 | 43 | 2.6e-06 | 27.4 | 3.7e-08 | 0.00014 | 22.0 |
| pfu_aug1.0_3134.1_59148.t1 | 2 | 2 | zf-C2H2 | 50 | 72 | 2.6e-06 | 27.4 | 0.00021 | 0.77 | 10.2 |
Transcript
| Transcript ID | pfu_aug1.0_3134.1_59148.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3134.1_59148.t1 atgactttttgtcccctgctttggcgaaagcgcggggacattaaaaccggagaacgtaagtttggttgtacagcttgtgg aaaggccttcagacactcagacaacctaaaggtacacatgaggcagcacacaaatgaaaaaccggtcaagtgtcatctat gtagctttgcgtgcagacagaaaagctcactgcaatatcatcttcgcaaatttcatcagatcttcaatcggccgagatca atcagttcagaggccaaaaacttatcaactttggttagtgcagtatatagtagtgttgacgatgggttaacttcatctgt ctcgtccgaatcaaaagaaaatcatcagggcttaccattagacagcaaggaggaaatagaggagcagaaaaacactgaac ctttctcacctattaaaaaatctcaaaatgctatggatttgtatgaatttagatctgacgaagaatttggtgacgattct atacttatgcctctaaggcaagaaaggacttccacacctcttagacctgaaaagatctcatctcatcaaagtgtttcgtt tgatgaaaatagtgaatcctcggataaaacggacacaaaattagacgatcaacagtcgagtactttgtcagagaaaaact ctggcgagattgttgaaagcattaaaatagaagatatcataattgaagaagtggtaaaatttgctgaaaacaatgaaggt gaatctagctttgtgaaaaatgatcaagtgaaggagcctgaagaaccagttaaagtgttgccaaaaccaaagaaaaagcc tggtagaaagaagggctttaagttgaaacccaagactgaggtgactgcagagccgatcaaagataaagatgaagctaaga atcctgaatctgaggaagtgacagaaaaggcagagcctcctgcaaagccaaaaggaaaacgtggccgtaaaccaaaagca cagaagttgctggaacaagcagagaaagtggaagctaagaatacatcagaagaaaaaccccaagaaaaacctcctagaaa gaaaccaggtccaaagccaaagaaggacaaagacaaaaaggaagttgacaaagcagtgaagattccaaagaagcgtggac caaagaaaaagaaagtggtaccagttgatgacaacactgaggaccaagaggaaccatctccaccaagaaagaagcgaaaa tatacacgcaggaaaagtactgggaaaaagcccggcagaaaaccaaagggcgaaaaggctgacaaagaggatagcgtgga ggaggaggaagaaaccatcatatacagtgagttggaccaaaacacagcaaaggaggatgaagatgatggagaagctactg aaattgaagggtttgatgatgatgacagaaagagtcctagtatagaggaaaaagcagaagaaaaggttgaagaatctgaa gaaatagttgaagttcctgagaagattcaggaagaaaatgacaacaaagaccctcagtctccagttattgaagaggagga ggaggaggaaaaggacaaggctgacacggctattgttccagaagtcacagaaaatgaagctgtagctaaagtagaggttg aggagaagaaaggtgaagaggagagtgagaggatgagtagtggtattgatactgattttgaggaggatctgaagccccct cctgctcctcgaccaccacctgtagtggacagcgatgagggagatatagagtcaggtcctgaagagatggacactccagg gagagattttgatgtaccaaactatggaagtattgaaaataagaatgatgtcctttcaccagaattacaacagcctccca gtcaaccaccattaagccaaggctacacagaggatagaagtgagctctccaatcctgtacctagcaatattagctacgct cctcctggctctgtagagctgccaggttccgctcagagtgtgcctcaagctacatcacaaaatggacaagagtatgtctc tcagtctgattctacaatgccagaggtggataaggattatcttggtcagtatctccagcagtttgattcgaatcgatctg aagatgaaaacaacagattatctcaggctgaagaaagaccagaagaccacctaaacattccaacatcaccacagaaagaa ctgtcttccttaaacatgagttctccaggtgtgccacctctcaatctctcaacatcatctgacagaggagaaggcattcc tcctaaaggaacagacatgtctaacaaacgaatggagattctttctgttgacagacaacatgaagaacactttcaaacaa gaagtgaaaaccccagtcgatcttcagaaagaataccagataatgtatatgatagcataagctctatgaactcttattta ccacctggatcaagggaaacaccaacaattttcccaccaacttcaacgtctacaccttacatgccattctcagagaatga ggccattttgcagaggcagaggatgacaactccattcttggcacaaaatgatcagaatgcattacaaaatcttcacagaa tgacagactcggcattagcatccaacaatccctcttctttactacgacggcctactactgtaccatcgagggaggaaata ttttcaaatccttcagctgtggcacagtcaatggctagaaacccatttcactctacatggtcaagtcaagatgttcgtca tccacactggagtcaaaccccgtatctacagcggcctattgacagacagtcaggaacaactaccaactctctctttgcca aggacaactacctcactgggcgtgactttgtgtttgatacttctagaagatcagttactgaaaggaatatgttcccagga cttgcacagtctcagagaccagagttgccccatgaaactttccctagcaatgagaggtttgactttagttactttgggct acctggctaccctggtgctcctactctggactatgctagatcagctgggaccacatcacagaaaacatttgatgagcgat acaggcaaacaacagggagtatggctgacttcaggggacttcctcagtccacaacctctgagatgtttagaagtatgaat tctacattcaactttgataagtatatgtatgcaagggatccaatgtatcatactcagcacattagtgaaagtactaacag tccatttcttccacatggtgtgcctacccagcatgctatgtttgatcgtgattacaccagaggattttaccagaatggac cttatggatttatgaatgataaaccttatgcagcagcggctgcagcagcttccgctaagctgtcacatactacaacccca gggatgggacaggatcgagaatttgtgccacgcccaaatacagcagcggcagcagcagctgatagtcagatgcaagatcc gtaccgacatcccatgctctataacatgatgaaccgatactttgaatga |
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Protein
| Protein ID | pfu_aug1.0_3134.1_59148.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3134.1_59148.t1 MTFCPLLWRKRGDIKTGERKFGCTACGKAFRHSDNLKVHMRQHTNEKPVKCHLCSFACRQKSSLQYHLRKFHQIFNRPRS ISSEAKNLSTLVSAVYSSVDDGLTSSVSSESKENHQGLPLDSKEEIEEQKNTEPFSPIKKSQNAMDLYEFRSDEEFGDDS ILMPLRQERTSTPLRPEKISSHQSVSFDENSESSDKTDTKLDDQQSSTLSEKNSGEIVESIKIEDIIIEEVVKFAENNEG ESSFVKNDQVKEPEEPVKVLPKPKKKPGRKKGFKLKPKTEVTAEPIKDKDEAKNPESEEVTEKAEPPAKPKGKRGRKPKA QKLLEQAEKVEAKNTSEEKPQEKPPRKKPGPKPKKDKDKKEVDKAVKIPKKRGPKKKKVVPVDDNTEDQEEPSPPRKKRK YTRRKSTGKKPGRKPKGEKADKEDSVEEEEETIIYSELDQNTAKEDEDDGEATEIEGFDDDDRKSPSIEEKAEEKVEESE EIVEVPEKIQEENDNKDPQSPVIEEEEEEEKDKADTAIVPEVTENEAVAKVEVEEKKGEEESERMSSGIDTDFEEDLKPP PAPRPPPVVDSDEGDIESGPEEMDTPGRDFDVPNYGSIENKNDVLSPELQQPPSQPPLSQGYTEDRSELSNPVPSNISYA PPGSVELPGSAQSVPQATSQNGQEYVSQSDSTMPEVDKDYLGQYLQQFDSNRSEDENNRLSQAEERPEDHLNIPTSPQKE LSSLNMSSPGVPPLNLSTSSDRGEGIPPKGTDMSNKRMEILSVDRQHEEHFQTRSENPSRSSERIPDNVYDSISSMNSYL PPGSRETPTIFPPTSTSTPYMPFSENEAILQRQRMTTPFLAQNDQNALQNLHRMTDSALASNNPSSLLRRPTTVPSREEI FSNPSAVAQSMARNPFHSTWSSQDVRHPHWSQTPYLQRPIDRQSGTTTNSLFAKDNYLTGRDFVFDTSRRSVTERNMFPG LAQSQRPELPHETFPSNERFDFSYFGLPGYPGAPTLDYARSAGTTSQKTFDERYRQTTGSMADFRGLPQSTTSEMFRSMN STFNFDKYMYARDPMYHTQHISESTNSPFLPHGVPTQHAMFDRDYTRGFYQNGPYGFMNDKPYAAAAAAASAKLSHTTTP GMGQDREFVPRPNTAAAAAADSQMQDPYRHPMLYNMMNRYFE |
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