Gene
| Gene Model ID | pfu_aug1.0_31414.1_70014 |
|---|---|
| Locus | scaffold31414.1 : 19910 ... 24319 : - |
| To GenomeBrowser | scaffold31414.1:19910..24319 |
| Genes list of scaffold | scaffold31414.1 |
| Synonym | pfu_aug2.0_58.1_26753 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_31414.1_70014.t1 | 1 | 1 | AHSA1 | 103 | 216 | 2.9e-25 | 88.7 | 7.8e-29 | 2.9e-25 | 88.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_31414.1_70014.t1 | gi|291235776|ref|XP_002737804.1| | PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_31414.1_70014.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_31414.1_70014.t1 ttttcagttactgttgacaaggagaatgatgaatcatacaaggtgaaagaagtactacggaaaaagggaacacaactggt acaagaaaaaatggcacagtatattagagaactcaaagaagaatatggaaaaggtgttattttgccgacaaaaacagatg taaaatcaacacttaatacagaatcacaagttaataaagcaaaagaagaaatgaacaaactggttataaatactggatct aaatccacaaatgtgggtgtgaaaataccaaccaagaaattcacaggaacagaaaagttcaaatgtagggcagaagacat ttatagagttctaacaactaaagagatggtacaggcctttactggagctcctgcagaaatggaagttgaaaagggaggca aattttctctacttcatggaaatataacaggcgaatttgtagaattggttccagagaagaaaatagttcagcgttggaga gtgaaagggtggccagacgcccattattctcaagtgacatttgaatttgatgaaaaagatgacagtactgtgttaacaat gactcaatcaggtgtacccgataatgaagtggagagaactaaagaaggctggaaaattaattactggaacagaatcaaac agatatttggatttgaagcgaggattttttga |
|
Protein
| Protein ID | pfu_aug1.0_31414.1_70014.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_31414.1_70014.t1 FSVTVDKENDESYKVKEVLRKKGTQLVQEKMAQYIRELKEEYGKGVILPTKTDVKSTLNTESQVNKAKEEMNKLVINTGS KSTNVGVKIPTKKFTGTEKFKCRAEDIYRVLTTKEMVQAFTGAPAEMEVEKGGKFSLLHGNITGEFVELVPEKKIVQRWR VKGWPDAHYSQVTFEFDEKDDSTVLTMTQSGVPDNEVERTKEGWKINYWNRIKQIFGFEARIF |
|