Gene
| Gene Model ID | pfu_aug1.0_317.1_14971 |
|---|---|
| Locus | scaffold317.1 : 45977 ... 62862 : - |
| To GenomeBrowser | scaffold317.1:45977..62862 |
| Genes list of scaffold | scaffold317.1 |
| Synonym | pfu_aug2.0_1302.1_08309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_317.1_14971.t1 | 10 | 1 | BRE1 | 184 | 216 | 3.3e-11 | 43.0 | 0.095 | 280.0 | 1.5 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 2 | BRE1 | 212 | 281 | 3.3e-11 | 43.0 | 0.93 | 2700.0 | -1.7 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 3 | BRE1 | 277 | 339 | 3.3e-11 | 43.0 | 0.52 | 1500.0 | -0.9 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 4 | BRE1 | 363 | 439 | 3.3e-11 | 43.0 | 0.23 | 670.0 | 0.3 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 5 | BRE1 | 456 | 524 | 3.3e-11 | 43.0 | 0.98 | 2900.0 | -1.7 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 6 | BRE1 | 530 | 593 | 3.3e-11 | 43.0 | 0.36 | 1100.0 | -0.3 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 7 | BRE1 | 599 | 625 | 3.3e-11 | 43.0 | 0.39 | 1100.0 | -0.4 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 8 | BRE1 | 630 | 727 | 3.3e-11 | 43.0 | 1.1e-14 | 3.3e-11 | 43.0 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 9 | BRE1 | 782 | 813 | 3.3e-11 | 43.0 | 0.11 | 310.0 | 1.4 |
| pfu_aug1.0_317.1_14971.t1 | 10 | 10 | BRE1 | 868 | 892 | 3.3e-11 | 43.0 | 0.59 | 1800.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_317.1_14971.t1 | gi|291241633|ref|XP_002740716.1| | PREDICTED: coiled-coil domain-containing protein 40-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_317.1_14971.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_317.1_14971.t1 tttgactcaggagaaatggagcaaaatggaacaacaaaagaggagcagccagcctcttcccgtcctacgtcagctaaacc ttcctccagacctacatctgccaagccagagccagttgaggagaaagctccaactcctacaaatgaggtgccaccagatg gcggtgaaggtggtgatggcggtgatggtggtgacggtgagccaccacaggaaccaccacagccacctccacaggatata agtaatatcctgaaccgaccagtgacagaaccagacggtggtgacggcggtggtggcggtgacagtgatgacgaggagga ggaaattgatgatggagaaggggaggagtctgatgctggaagtgaggctgaaacggacatggttgtccttgacccagatc atcctctaatgaaaagattccaaaatgccctcaaagctcatctaacgaaacaagatgagaaggtaactctggaactacga gagttgatagaggcgcttaggaatcgtaaaaaagagcgggaggatctcggtgtagaactgtatggaatccagcaggaact ggccagattccagatgatgttagagaaaaatcatgatgaattcgccaatctgaaccaggctcgtaatcaggaggaacagc agctagatgacgtgaggggattatacaaggatacccaactaaacgtcaacaaggagaaaaagaaatgtgctgaattacaa agtgaagttgaaaatctggcattaagacatttttacatgcaaaatgccaaagaagatgtgaggtctgacattgctataat gaggagagctgcagaaaaagcagacacagaggtgtctaaagctgaaatcgaaaagcagagacaggatttgtttgtggaca gactggttgagagagtagacaaactaaaggaggagattgccatgtttgaagctcagatagcagctcaaacagaggagacc aaagctgccaaagaagctctgttagaagctcacatggaaattgaggctattcaactagagaaaaagcagttgttccagca atggaatagttcccttattggtatgaggaggagagacgaggcacatgccgccatgcaggaagctcttaatacccaggaac aaaaagtgttgtccttagaaacagagattgagggatataagaaatctatattcaaggaacaagaacaaaatgagaaactg acattaattttgaacaagacggaaagggacatagagacagtgaagaaacagctgactcagtgccaagccaagcatgacgc actgaaagcagagtacgctacttataccagaatgttacacgagacagaacaagctcttaacagagctgtcacagataaaa ccctacgactgaatgaacttaatgcactgaggaagcagattgagagagaatatttggagaaagtagaacttgaggatgaa ataatggagaagatgaggagtcaactgaccatggacaaagctgcccagtacaccaagaaactgaccggcaagaaaaggga actcacaaaacaactggaaacacaaatggcagaggttgaaaatcaaatatcaagagacagtttagaaatatccaatgttc aaacaaggatagaaagacttggaaaaatcttgggtcaacttgatgatgaaattggcggtaaaaatgaagtgatcagtaag agtgaaggagagattgtcaagcgtaatgccattatagagaggaagcagaatattattgatcaatataacaaaaaactgga ggttctcatcagtaaggctggtggtgtagagttaggtcccttggagatccagatcaattctctacagaagtctatcgagg ctcgtcaacaggagatagcggagctccagcagatgtggctacgtcagcagagcgagcttgtacagctatctaaagataag gacgctcagtccagcgacgtacagaaactcaaaaaacaactcactatactgtctcaaaagaaaatcaggactgaaggtga cattgatgagcagaggagggagacgtatgacatagagaggagtatcagaaacatgcaaaatgacatgatcaaactgaaca ctctactgaataaggagaaaggaactcacgaatgtcttcaccaggataatattctactggaaaacgactttatcatggca cttaaggaggcagagaaggaatcaattcagatgcaggcaaacctggataacattaaggaagagaaggagcgtctgctgaa cagcctggttgaagctgaacgacagatcatgttatgggagaagaaaacccagttggcccgtgagactcgagctgcagtag attctgaagtaggtcaaggtgaaatcaaggccatgaaggcggagattcatcgtatgcaagtcaggttcacccagctgatg aaacaacaggagaaaatgatacaggaaatggagaaagctgtgtcaaggagagacaccattgtcactagaggtgatgcctc ccagaagatcaacaagaaagtgctaactaaaggaacgtttgagagacagatgggagaactgaggaagaaaatcaaagcta caataaatgaagcaggttcttgtgatggagagatcctagatctccgttcccatcaaggtgacctgagttctcagttagaa cagagacaagtcaatgtacagcagttacagagcacatctgataccatggatggtgacatagagagactttatgaaatcaa acaaaagaatctaacagagcttctaggaaaacaacagaagtcaaaatattttcaacaagctaaggatggaaaatatgtca tgttatgcaaatctgaatcttcgttagaaaatgaacatacaaaacaggttgaccgtatgcaggcactgagtgccatagtg gataggttaaatcaggagttcccacatatacagcctgcgctccgtaaggttacactggctctgagcacgcgcggagatcc aagtcaggattag |
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Protein
| Protein ID | pfu_aug1.0_317.1_14971.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_317.1_14971.t1 FDSGEMEQNGTTKEEQPASSRPTSAKPSSRPTSAKPEPVEEKAPTPTNEVPPDGGEGGDGGDGGDGEPPQEPPQPPPQDI SNILNRPVTEPDGGDGGGGGDSDDEEEEIDDGEGEESDAGSEAETDMVVLDPDHPLMKRFQNALKAHLTKQDEKVTLELR ELIEALRNRKKEREDLGVELYGIQQELARFQMMLEKNHDEFANLNQARNQEEQQLDDVRGLYKDTQLNVNKEKKKCAELQ SEVENLALRHFYMQNAKEDVRSDIAIMRRAAEKADTEVSKAEIEKQRQDLFVDRLVERVDKLKEEIAMFEAQIAAQTEET KAAKEALLEAHMEIEAIQLEKKQLFQQWNSSLIGMRRRDEAHAAMQEALNTQEQKVLSLETEIEGYKKSIFKEQEQNEKL TLILNKTERDIETVKKQLTQCQAKHDALKAEYATYTRMLHETEQALNRAVTDKTLRLNELNALRKQIEREYLEKVELEDE IMEKMRSQLTMDKAAQYTKKLTGKKRELTKQLETQMAEVENQISRDSLEISNVQTRIERLGKILGQLDDEIGGKNEVISK SEGEIVKRNAIIERKQNIIDQYNKKLEVLISKAGGVELGPLEIQINSLQKSIEARQQEIAELQQMWLRQQSELVQLSKDK DAQSSDVQKLKKQLTILSQKKIRTEGDIDEQRRETYDIERSIRNMQNDMIKLNTLLNKEKGTHECLHQDNILLENDFIMA LKEAEKESIQMQANLDNIKEEKERLLNSLVEAERQIMLWEKKTQLARETRAAVDSEVGQGEIKAMKAEIHRMQVRFTQLM KQQEKMIQEMEKAVSRRDTIVTRGDASQKINKKVLTKGTFERQMGELRKKIKATINEAGSCDGEILDLRSHQGDLSSQLE QRQVNVQQLQSTSDTMDGDIERLYEIKQKNLTELLGKQQKSKYFQQAKDGKYVMLCKSESSLENEHTKQVDRMQALSAIV DRLNQEFPHIQPALRKVTLALSTRGDPSQD |
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