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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3178.1_51914
Locus scaffold3178.1 : 26466 ... 42583 : +
To GenomeBrowser scaffold3178.1:26466..42583
Genes list of scaffold scaffold3178.1
Synonym pfu_aug2.0_374.1_14064

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3178.1_51914.t1 gi|241606637|ref|XP_002406278.1| E3 ubiquitin ligase, putative [Ixodes scapularis] 1.0e-34

Transcript
Transcript IDpfu_aug1.0_3178.1_51914.t1
Definition-
>pfu_aug1.0_3178.1_51914.t1
atgtgtggctacaagtccatgtgtactattgaggcagcaggcaaaaaccatgatgggatggctaggacttccagtagtaa
cagagtgtctattcaagatgagttaagttctctgacatccaactcggaaactgatttaagagggagtatgcagcaagacg
caagtaccaaggatgacctggaagaccaggaggattctgggatatctttgagtgcagtcatgcgtggaagagtaccagat
gaagtggaccatgaatttgcaacaaatgaggaagaaattctgagctgtagtccatcaaatttagcagcaattcccaatat
aaagtgtgaatttcattttgattctgacgatgggacggttcaagattcagtggaagattcgcctctgaacatatcccatg
attcaccaaagagaactacagtggtgccacctagtgacgaagttctagatgaagaggagagaaatccacctagtatttta
attgatgaatttgatagggaagatgacactatatcttctgctgggaatgaatcattgactttagaagctgaaagtttaga
tactacctcattagataatgaagtcagagctgtgatgtctgaaggtgctacagcccctccaaccctgcccccacgaactt
acagggccccgcctttgcctcctcggcagaggacttctagtgctccacccataccccctcgaacccctgacagggctgag
aagcctggatttccctccagtggtactgctgttgtgcagattttacctagtcctgacaatagcaaggagtctgaagatca
taatgctacaaattctcaacagacacggtcacaagtttcctcaattcaacccaaagagtctcaaatacctatgcctcaag
tccctgcaccccctgtccctgtagcagatccacatatagatagggttaattccttagagccccctcctcttccccctagg
acatacagtcctgtcaatgtcgccaacacgactgcaggagtatgcagtccagataaggaagaaaaagacaacagcgctac
aagctttgatagtatggaaacatatcatgactctgaagaaaatgctatacagccagaacatgtctcagaattggcaacct
ctgtgacaagacagtcaagttttggtcgtcctcatcgcgctattgtagccttaccagaggcacgggtgaaaccacgtaga
aatcgaagatcaagtcccgatgaagaaattcgtgatttagtgggtaggggtcataatggtcctcagtctgattcaaacaa
tagtactgtgttctctcagctgtctcagttacaaagtatagagtctgctgttgatcatagccggacagcaacctctggaa
gtaggtcactagagtgtagtccacgagtcagtccactttctatgcagtcatctttctcagattctataaccgacagacga
tacgccaatccattccgacaaatgagacgaaacttcaattttcctatttctgaagtgagcggacaatatcagcataatcg
tgatctagtgtctttcctcaaccattttgctgataccaacagagatctacctctaaactgggagatgaaatttgatcgca
gtggaaagacatttttcattgaccataatgctcgcttaaccacatttattgaccctcgcttgccagctgatatcccacct
atcaacactgacttcctacacacatctttattgttccgtaaccgaccaaggaccgcatacaatgacaaagtggtagcgtt
tttgaagcagcctaatatctcagaaattttatcggaaaaatatgcatcgtacaccaacaacacacgattaaaggagaagg
taaacaaaatacgtacggagggaacggatgccctggacaggatgtgtaacgatatagatctgatacttctattaaggtag

Protein
Protein IDpfu_aug1.0_3178.1_51914.t1
Definition-
>pfu_aug1.0_3178.1_51914.t1
MCGYKSMCTIEAAGKNHDGMARTSSSNRVSIQDELSSLTSNSETDLRGSMQQDASTKDDLEDQEDSGISLSAVMRGRVPD
EVDHEFATNEEEILSCSPSNLAAIPNIKCEFHFDSDDGTVQDSVEDSPLNISHDSPKRTTVVPPSDEVLDEEERNPPSIL
IDEFDREDDTISSAGNESLTLEAESLDTTSLDNEVRAVMSEGATAPPTLPPRTYRAPPLPPRQRTSSAPPIPPRTPDRAE
KPGFPSSGTAVVQILPSPDNSKESEDHNATNSQQTRSQVSSIQPKESQIPMPQVPAPPVPVADPHIDRVNSLEPPPLPPR
TYSPVNVANTTAGVCSPDKEEKDNSATSFDSMETYHDSEENAIQPEHVSELATSVTRQSSFGRPHRAIVALPEARVKPRR
NRRSSPDEEIRDLVGRGHNGPQSDSNNSTVFSQLSQLQSIESAVDHSRTATSGSRSLECSPRVSPLSMQSSFSDSITDRR
YANPFRQMRRNFNFPISEVSGQYQHNRDLVSFLNHFADTNRDLPLNWEMKFDRSGKTFFIDHNARLTTFIDPRLPADIPP
INTDFLHTSLLFRNRPRTAYNDKVVAFLKQPNISEILSEKYASYTNNTRLKEKVNKIRTEGTDALDRMCNDIDLILLLR

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