Gene
| Gene Model ID | pfu_aug1.0_319.1_00235 |
|---|---|
| Locus | scaffold319.1 : 26876 ... 48268 : + |
| To GenomeBrowser | scaffold319.1:26876..48268 |
| Genes list of scaffold | scaffold319.1 |
| Synonym | pfu_aug2.0_688.1_27669 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_319.1_00235.t1 | 1 | 1 | Glyco_tranf_2_3 | 212 | 426 | 1.1e-08 | 35.1 | 9.4e-12 | 2.8e-08 | 33.8 |
| pfu_aug1.0_319.1_00235.t1 | 1 | 1 | Glycos_transf_2 | 213 | 402 | 8.5e-28 | 97.1 | 4.5e-31 | 1.3e-27 | 96.4 |
| pfu_aug1.0_319.1_00235.t1 | 1 | 1 | Glyco_tranf_2_2 | 213 | 427 | 1.3e-12 | 47.3 | 4.3e-15 | 1.3e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_319.1_00235.t1 | gi|198434303|ref|XP_002132126.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase-like 6 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_319.1_00235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_319.1_00235.t1 atgtgcattcctgacggagtccgaaaagacgtcagaaatggaaccaaaaagagcaacacttcttatgacatctgtatgga tcattctgatgctttcagtttgtcgatacatgcttccgtggtgaggaaaacgtttgtcaaaggagggtacctaatgacgg attcggacgaaacatactacacttgtttgctaggggtccgtcgatgctcaattcggtgctctactgtgagtgctgtcgag attatcgtcaggatcttctttaactcatttatgtcacacttatgccctttgccgtgtggagctcttaaaaaagttccccg cgaggggtttgacagtgaaggtggcacagctgtcaatcttgacaaatcattgttatctacggaacaaaaggatatcttcg attccggatatcagaaacatgggttcaatgtgtttgccagtaatttgatatctttagatcggacattaaaggatatcaca agaagtgaagagccagaatacgtcagaatgacaaatgtttcaatatccagcagcagcagcagcaagaccaccaccatcac cactaccgccgccgtcgccgccgccgccgcccagagatgtagtcgaaagacatatccttcagacttgcctcttgtgtctg tcatcattccctttcgcaatgaagcattatctgtccttctgaggactgtgcattgtataatcaacacaacacctcaacaa aatctggttgacattatcctggtggatgacggttccacggatgatgatgttaagtcaattttagacgtacatatcaaagg aatgagaaaagtaaagattttacgtctctcaagtagcgtgggactgatgggagctcgccagaaagggattgagaatgcaa catcggacataatcgttgtcatggattcacacatggaagttacagcaggttggtttgaacccattgcaactgagatgaaa atggaccccaaagctctactgactggacaggttggcgttatagacaaggatacattccaatttcaatcatttccgctgga caaagtccccgagaattccctcgattaccagacgttcgatttctacctctaccagactggggcattcttgaaagaagagt atttgaaaacaaggaagatgaaatctgatccattctatattcctgccatccaaggtaacttcttcatgatgaacagaaca atgtttttgaaattagggggatttgatcttgggatgaagttatggggagctgaacagtttgaactctcgtttaagttgga gtatggagatgtcgaagaacgccggaaaatacgaaggacgaataaatgcaaatcatttcagtattacttggataaagtca aaacatttgctcatatctacatacctagaggaagaaaggcaaaagggatagtaggttatcttcattgctttctatttagt attatcatattggaatag |
|
Protein
| Protein ID | pfu_aug1.0_319.1_00235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_319.1_00235.t1 MCIPDGVRKDVRNGTKKSNTSYDICMDHSDAFSLSIHASVVRKTFVKGGYLMTDSDETYYTCLLGVRRCSIRCSTVSAVE IIVRIFFNSFMSHLCPLPCGALKKVPREGFDSEGGTAVNLDKSLLSTEQKDIFDSGYQKHGFNVFASNLISLDRTLKDIT RSEEPEYVRMTNVSISSSSSSKTTTITTTAAVAAAAAQRCSRKTYPSDLPLVSVIIPFRNEALSVLLRTVHCIINTTPQQ NLVDIILVDDGSTDDDVKSILDVHIKGMRKVKILRLSSSVGLMGARQKGIENATSDIIVVMDSHMEVTAGWFEPIATEMK MDPKALLTGQVGVIDKDTFQFQSFPLDKVPENSLDYQTFDFYLYQTGAFLKEEYLKTRKMKSDPFYIPAIQGNFFMMNRT MFLKLGGFDLGMKLWGAEQFELSFKLEYGDVEERRKIRRTNKCKSFQYYLDKVKTFAHIYIPRGRKAKGIVGYLHCFLFS IIILE |
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