Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3197.1_23216
Locus scaffold3197.1 : 1 ... 4185 : -
To GenomeBrowser scaffold3197.1:1..4185
Genes list of scaffold scaffold3197.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3197.1_23216.t1 gi|345481678|ref|XP_003424428.1| PREDICTED: IQ motif and SEC7 domain-containing protein 1 isoform X2 [Nasonia vitripennis] 8.00001e-42

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3197.1_23216.t1
Definition-
>pfu_aug1.0_3197.1_23216.t1
atgctggtaggaatttacgagcgaatcagaaaccaggaattccgcgctggtgtagaccacgtgactcaggtcatgaaagt
agaacagacagtcgtgggcaagcgacctatactagctctacctcatagacgtttagtgtgctattgccgtttatatgaag
tccacgatccaaacaagaaagaaaaaatagggctccatcaacgagaagttttcctctttaatgatcttctattagtatct
aaaatcttcagtaaaaagaaaagtggtatcacctattcctataaacagtccttctcattatgtggaatgcaagtcttcct
ctttgaaacatctcgtaagtaa

Protein
Protein IDpfu_aug1.0_3197.1_23216.t1
Definition-
>pfu_aug1.0_3197.1_23216.t1
MLVGIYERIRNQEFRAGVDHVTQVMKVEQTVVGKRPILALPHRRLVCYCRLYEVHDPNKKEKIGLHQREVFLFNDLLLVS
KIFSKKKSGITYSYKQSFSLCGMQVFLFETSRK

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