Gene
| Gene Model ID | pfu_aug1.0_3197.1_23220 |
|---|---|
| Locus | scaffold3197.1 : 44246 ... 57743 : + |
| To GenomeBrowser | scaffold3197.1:44246..57743 |
| Genes list of scaffold | scaffold3197.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3197.1_23220.t1 | 2 | 1 | CBM_14 | 144 | 179 | 2.7e-06 | 27.1 | 2.4e-05 | 0.18 | 11.7 |
| pfu_aug1.0_3197.1_23220.t1 | 2 | 2 | CBM_14 | 211 | 247 | 2.7e-06 | 27.1 | 5.2e-10 | 3.9e-06 | 26.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3197.1_23220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3197.1_23220.t1 atgcgaaaactcaggatttatcgcgcttcccgcggttacttgactcggagttaccgtgtggattgtgcatgtcgagtcat tctctgcaattacattaatgaaaataaaaaaaggaaaatggaattatttatacagctcttggcgatcatttccatttttg gatccagcatcgcggacgatgtgaaatgcgaagatcgattcggggcgatagtgacggacgattgtaaaaccctgtatcgg tttagccagtttgatgaatgccagtacaagacgaatggaaacgataaaggcgataaggttactcggaaatgtgagaactt cacaaaagtagactgcggtacgagaaaggaacacaaatctgcatgtgactacagaaagttcatgtgtgacggaccaaact gcataccatgtgaagtggaacacccaagctgtgagggtaagaaagacggactacatccccatgggtggaagaaaaattcc ccctacttcatgatctgtaagggagagagattcatatccagtgggcagtgcgagaccgaggtagagctacatgaattcaa gttccctcaaaatggcacgtgcgtcagccgttatgaggtaccgaaagaaatgggtggtttactgcctgactgtgagggaa aaatggagggcagctacagggacgagcagggccgatgtgataggtacttcgcgtgtaatggcgggaaacccagtgtgatg aaatgcccagaggctcaagttttgacctggaggcccggaatgtgtagagggcggtaa |
|
Protein
| Protein ID | pfu_aug1.0_3197.1_23220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3197.1_23220.t1 MRKLRIYRASRGYLTRSYRVDCACRVILCNYINENKKRKMELFIQLLAIISIFGSSIADDVKCEDRFGAIVTDDCKTLYR FSQFDECQYKTNGNDKGDKVTRKCENFTKVDCGTRKEHKSACDYRKFMCDGPNCIPCEVEHPSCEGKKDGLHPHGWKKNS PYFMICKGERFISSGQCETEVELHEFKFPQNGTCVSRYEVPKEMGGLLPDCEGKMEGSYRDEQGRCDRYFACNGGKPSVM KCPEAQVLTWRPGMCRGR |
|