Gene
| Gene Model ID | pfu_aug1.0_3199.1_23224 |
|---|---|
| Locus | scaffold3199.1 : 28647 ... 36565 : - |
| To GenomeBrowser | scaffold3199.1:28647..36565 |
| Genes list of scaffold | scaffold3199.1 |
| Synonym | pfu_aug2.0_1522.1_08420 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3199.1_23224.t1 | 1 | 1 | NAAA-beta | 30 | 125 | 4.9e-23 | 81.2 | 1.3e-26 | 9.8e-23 | 80.3 |
| pfu_aug1.0_3199.1_23224.t1 | 2 | 1 | CBAH | 129 | 303 | 5.9e-11 | 42.3 | 3.6e-14 | 2.7e-10 | 40.2 |
| pfu_aug1.0_3199.1_23224.t1 | 2 | 2 | CBAH | 317 | 345 | 5.9e-11 | 42.3 | 0.04 | 290.0 | 0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3199.1_23224.t1 | gi|156388990|ref|XP_001634775.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3199.1_23224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3199.1_23224.t1 atggcagcttccttgttcgcaaattctttcgccgtttgtttccttgtgtgttttacgctaggagcatcaccaccggacaa tcctgtcgcaccacctcgttaccaaatcaacctagacctccccgaggaaaagagatggaccgagctgatgaaaaactatg ctcaaataggaccagatgcatacaatgtgatttattcctatgttcactccttgccgccccctctccctaacatcaccata aaggtgatagagatggttgctgctgatgtggaccagtacctaccatcaccgtatgccacggaaatgagaggaatcgccaa gtccttaaacatagatctcggtctgattgttggaatgaacattttatacgatgttactgcgttttgtaccagtattgtaa tgcaggacagtaaaggtgtgatttggcacgccaggaacctggactatagctatactgacatgcttaggaacatcacagta caagtcgacttcatacaaaacaacaagacagtgtacagcggggtgacttacgccggatacgtggggctgctgactggtat gagacctaaagcctttaccatcaccatagacgagagagatcagggtgcatggtgggaaaacttcctgataggaattattg acaggaaagcagaacccattggcttcctgattagggatgtgctagctaacgagaccacgtttgaatcagctgttaagaga ctatcatttaccacaaccgaagcatctgcttacttcatagtgggtggagtgggcaaggacgagggcgtggtcatcaccaa aggccgcatagcacctgttgatacttggcaattggatacagccaatggacgatggtatgaagtagagacaaattacgatc attggggacccgtgccaaaaacagacgacagaagggatccagcaaataagaagatggttgccatgggacagaacgtaacc gtagataatctgtttgacgttatgtccacagtgcccgtacttaatgatgatacaacatacaccatcatcatgtcggcgtc acaaccggacattaccaaagtctggatccgaaactgtcacacgtgtcccaaaacttga |
|
Protein
| Protein ID | pfu_aug1.0_3199.1_23224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3199.1_23224.t1 MAASLFANSFAVCFLVCFTLGASPPDNPVAPPRYQINLDLPEEKRWTELMKNYAQIGPDAYNVIYSYVHSLPPPLPNITI KVIEMVAADVDQYLPSPYATEMRGIAKSLNIDLGLIVGMNILYDVTAFCTSIVMQDSKGVIWHARNLDYSYTDMLRNITV QVDFIQNNKTVYSGVTYAGYVGLLTGMRPKAFTITIDERDQGAWWENFLIGIIDRKAEPIGFLIRDVLANETTFESAVKR LSFTTTEASAYFIVGGVGKDEGVVITKGRIAPVDTWQLDTANGRWYEVETNYDHWGPVPKTDDRRDPANKKMVAMGQNVT VDNLFDVMSTVPVLNDDTTYTIIMSASQPDITKVWIRNCHTCPKT |
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