Gene
| Gene Model ID | pfu_aug1.0_320.1_50793 |
|---|---|
| Locus | scaffold320.1 : 76536 ... 81693 : + |
| To GenomeBrowser | scaffold320.1:76536..81693 |
| Genes list of scaffold | scaffold320.1 |
| Synonym | pfu_aug2.0_580.1_00909 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_320.1_50793.t1 | 1 | 1 | Glyco_tranf_2_3 | 77 | 296 | 2.0e-07 | 31.0 | 2.2e-10 | 5.4e-07 | 29.6 |
| pfu_aug1.0_320.1_50793.t1 | 1 | 1 | Glycos_transf_2 | 79 | 263 | 4.0e-24 | 85.2 | 3.0e-27 | 7.4e-24 | 84.3 |
| pfu_aug1.0_320.1_50793.t1 | 1 | 1 | Glyco_tranf_2_2 | 109 | 295 | 4.4e-07 | 29.2 | 2.8e-10 | 6.9e-07 | 28.6 |
| pfu_aug1.0_320.1_50793.t1 | 1 | 1 | Glyco_transf_7C | 243 | 304 | 8.7e-12 | 44.3 | 8.2e-15 | 2.0e-11 | 43.1 |
| pfu_aug1.0_320.1_50793.t1 | 1 | 1 | Ricin_B_lectin | 393 | 492 | 1.6e-06 | 28.1 | 1.2e-09 | 2.9e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_320.1_50793.t1 | gi|302565702|ref|NP_001181690.1| | polypeptide N-acetylgalactosaminyltransferase 4 [Macaca mulatta] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_320.1_50793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_320.1_50793.t1 atgttaaattttatgctctattattatttgcgcaatgactttaaacattttacgttacgttacttaaaattgtgtaatat gatgagaattgacccaaactggaaggttacgcaggaacgatacttcgttaatatcacaaggagtaatgaaatcggcgaca atcggacagtaccagacacgagacctccaggatgcagtagtgttccttataacattgaaatgcttccaactgcatctatc gttatattgatgtatgaggaaccttggtcaacattgctaaggacgatacatagtgtactgaccaatactccgggtattct tctaacagaactaattgttatagacgactatagtcaacacccggcattacagaaaccattggaaaggtacctggagcagc tgactaaagttaaactcgccagatccaaagagaggcttggagtgatcaggggtagacaactagggttggatctagctacc ggtgacgtagttgtttatgtagactctcattgtgaggtgaatgttggctggttagaaccaatgttgtatgaaatcgccaa gaataatcacacagcgactgcacctatactcgattacatcaatccaatgtccttagaatacaagtctgtagggaatttta tgagagggggtatgatgtgggatttatcatacaaatacaccgatattccaccacatacgaagacgggattgttgcctata gattcatactctacaccggcgatatccggggggacattcgctattagtagaaaatatctacaagatttgggtggatttcc aaccagtatgaaagtctggggaggagaggacgtggagctatccattagggtatggttgtgcggaggaaggttactcaact gtccatgttctagagtcggtcatgtctttaagaatagccacgtgtataagatcaatcctcgagatgctaatgtaaacatt gttcagatagcggagacttggttgggtccttataaagaacatttctacgccatcactgggggaacactaaaacagtccca tattacgtccatcagtgagtttgattccgtgaaatggacattcaaatgcaagacatttgattggtacattgagaacgttt tcccagaattagggaccccgcctctcggtgcgctttactttggcccacttggacttgacggattctgccttggtctagac agggacacctataacgtactgagtttatttaactgttttagttataagagtaagaattttgcgttgatgacatcaggaga gctacgtttggacaactattgtgttgtccctgatactatgactatcaaactcagagattgtcacgattccagttatgcta aatggacttacgtggacaaaacattgagttttgacaacaatatttgtatagatgtacaaaacagggcatatctcaaaata aggtcttgtgaacgaaaggaaaacatggcaaagtgggaatttcggtacaaacttacttatctttag |
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Protein
| Protein ID | pfu_aug1.0_320.1_50793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_320.1_50793.t1 MLNFMLYYYLRNDFKHFTLRYLKLCNMMRIDPNWKVTQERYFVNITRSNEIGDNRTVPDTRPPGCSSVPYNIEMLPTASI VILMYEEPWSTLLRTIHSVLTNTPGILLTELIVIDDYSQHPALQKPLERYLEQLTKVKLARSKERLGVIRGRQLGLDLAT GDVVVYVDSHCEVNVGWLEPMLYEIAKNNHTATAPILDYINPMSLEYKSVGNFMRGGMMWDLSYKYTDIPPHTKTGLLPI DSYSTPAISGGTFAISRKYLQDLGGFPTSMKVWGGEDVELSIRVWLCGGRLLNCPCSRVGHVFKNSHVYKINPRDANVNI VQIAETWLGPYKEHFYAITGGTLKQSHITSISEFDSVKWTFKCKTFDWYIENVFPELGTPPLGALYFGPLGLDGFCLGLD RDTYNVLSLFNCFSYKSKNFALMTSGELRLDNYCVVPDTMTIKLRDCHDSSYAKWTYVDKTLSFDNNICIDVQNRAYLKI RSCERKENMAKWEFRYKLTYL |
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