Gene
| Gene Model ID | pfu_aug1.0_320649.1_36017 |
|---|---|
| Locus | scaffold320649.1 : 1 ... 504 : + |
| To GenomeBrowser | scaffold320649.1:1..504 |
| Genes list of scaffold | scaffold320649.1 |
| Synonym | pfu_aug2.0_875.1_17896 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_320649.1_36017.t1 | 2 | 1 | EF-hand_1 | 10 | 19 | 3.9e-06 | 25.7 | 0.41 | 880.0 | -0.4 |
| pfu_aug1.0_320649.1_36017.t1 | 2 | 2 | EF-hand_1 | 40 | 64 | 3.9e-06 | 25.7 | 7.8e-09 | 1.6e-05 | 23.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_320649.1_36017.t1 | gi|4579903|dbj|BAA75223.1| | sarcoplasmic calcium binding protein [Ruditapes philippinarum] | 3.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| adductorMuscle | 3 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_320649.1_36017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_320649.1_36017.t1 tacatatttggaaagaacggaccaaaggagatttcagaggctgattttgtcaagagattgcagacggcctacgaaaccga caaggcggcctttgtaaaaaagatggaagattgctttaacacgatttttgatgtgattgacaccaacaaagatcgccaaa ttgagctggatgaattcgtcctcgtatttaagctttcggccacgagaacgaaccggccgtaa |
|
Protein
| Protein ID | pfu_aug1.0_320649.1_36017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_320649.1_36017.t1 YIFGKNGPKEISEADFVKRLQTAYETDKAAFVKKMEDCFNTIFDVIDTNKDRQIELDEFVLVFKLSATRTNRP |
|