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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_32065.1_70039
Locus scaffold32065.1 : 1 ... 6909 : +
To GenomeBrowser scaffold32065.1:1..6909
Genes list of scaffold scaffold32065.1
Synonym pfu_aug2.0_7921.1_06319

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_32065.1_70039.t1 1 1 HAUS5 17 209 2.3e-14 52.9 6.9e-18 3.4e-14 52.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_32065.1_70039.t1
Definition-
>pfu_aug1.0_32065.1_70039.t1
gaaaggaacagaaaatgaggaatatttcagtaggaagaaaagctcgactgatgaagatcattacacaaattcatctggat
tagagaccaaatgtagtgagaattatttccatcagtgtcagagatttgttgagacagaaaagtacaaaaacgagacgtgg
aaactggatcaaaagtttgaggagatctcacaacagattgacatcaaacttcattctatgtttcctaaaagggaagatgt
caaacttgtaagagcttatatagatgacaagattttatttgagggaaaacgagctgccttacacagtgctcatgaagaga
cgacagagcttagagagttagtcatacagtcacagcagcagcatgaaatgctcatggcaaagtataggaaaatacacgac
ttccaggcatcggctgataggaaacagcaactcataagagtattggtgaaacagaacgcagaagccaaatcacggctaga
tacacagaagaaaaagattctagagtactgtcaaagattattaacggttcataaaatggaagtacgaacgttaaaaactg
gtttacaaggcagcatagccacggaggtgactaaattcacatctttacatctaccgtacctaatgtatgctgaatctgat
gacaggtaa

Protein
Protein IDpfu_aug1.0_32065.1_70039.t1
Definition-
>pfu_aug1.0_32065.1_70039.t1
KGTENEEYFSRKKSSTDEDHYTNSSGLETKCSENYFHQCQRFVETEKYKNETWKLDQKFEEISQQIDIKLHSMFPKREDV
KLVRAYIDDKILFEGKRAALHSAHEETTELRELVIQSQQQHEMLMAKYRKIHDFQASADRKQQLIRVLVKQNAEAKSRLD
TQKKKILEYCQRLLTVHKMEVRTLKTGLQGSIATEVTKFTSLHLPYLMYAESDDR

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