Gene
| Gene Model ID | pfu_aug1.0_322.1_14977 |
|---|---|
| Locus | scaffold322.1 : 45117 ... 64378 : - |
| To GenomeBrowser | scaffold322.1:45117..64378 |
| Genes list of scaffold | scaffold322.1 |
| Synonym | pfu_aug2.0_964.1_14692 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_322.1_14977.t1 | 1 | 1 | Tudor-knot | 125 | 169 | 7.4e-08 | 31.9 | 5.7e-11 | 2.8e-07 | 30.1 |
| pfu_aug1.0_322.1_14977.t1 | 1 | 1 | PHD | 558 | 602 | 2.2e-07 | 30.4 | 1.1e-10 | 5.2e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_322.1_14977.t1 | gi|156372819|ref|XP_001629233.1| | predicted protein [Nematostella vectensis] | 5.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_322.1_14977.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_322.1_14977.t1 atgaaaaccccacgaaaacgtggtggcgtcaagaccaatcagagccaaactctagaaatacatagagaaggaaaaattct tggtgaggagaatgagtctttgctgcagagtagcccacctcctggatccattcccagtgtgtccctccagaccacacccg aggatcctgatcccccagggtcagagggaggcagtagcagagggagttcagagagaggcactcctgtaaagtaccgacgt ggttcacggttgagtgattccttccaggacaatgctagtacatgctctagtacatcatccgttggtgggtctgctagtaa aacgatgaataattccaagtttccagtacgacctggcatctcatggaaaaaaggggagagggtagaagctatggacttca tgaataagtggtatcctgctaagatagtggacattgaagaggatgagcaatcagtgatgatccactttgatggctggaac tctagatatgacgaatgggtgccgatgaccagtgagaagctacgtccacgtgtcagatactcatcacgtaaagacaaacc aagacacgggaaaatagaaatagttcatgtgctgccgaaagacgagaagaaaagatctggcgaaacggaagtgacgggga aaaggcgcagttcttcagtttattcaaggagaagtgtggatgaagcagaaggtggtgacagagaaatggttgaaactgta gaaaaagttaaagctgtgcaaaaacggaaaagctctggctcaagggaacgtaaaaagaaagatagcagtaaatcggccac tatgtctagagtgcccagcactgagacattaatcgccaatgtaaccgaatctagaggagatgaagagatggttgagggtg ttatgtctccttctggtaccgaccctgcctatgcagatcctggagtgaaacaaacactcagttatgaggaggatgaggga gctgtgtctggctgtatacaggccgatttgcaggaagaaaaacaggaagtggcggaggagtccaaggaaatcatggagtc tccttcagagcagatgactgatgctaacgcaatctctgtgaagacagacctgtctaccaccatacctgcctccccagcta gcacgctgtctgacaaaaaagctaagaaggaggtgatatcaccgtctatatctgaatccagtgtcggttcacatacagaa tctgctgaggccctcaacaggaagagaagcaagtcttcatttgagaaaagttacccatctgctttgtcatctgatctagc cttgagcagaaagaggagtaggtctgccactacagagcgcagtaagggtatcggtaattatattttggtaccggagacag aaccgcctcccaaggcctttgttgtggagcaggaacacaatcattataaatgtacatttgaaggatgtaataaagggttt aggaaggagagtcttctagattatcatctcaaatactaccattctaatgatgggaaacctgtacagatacctccccccag aaaacgtaggaaaacatccagtatattcacagatgaacatttggatgaggagtcaaatcgtcagaggaccatcagtcaaa ataccatggtaacggaagacgtcatggaaacggacgcagaggacaccctcagtaaagacgaagtagtcaactgtatatgt ggtttttatgaagagaatggacttatgatacagtgtgacgtgtgtctgtgttggcaacatgctgcgtgttttgagataac agaagccacactgccaaagaaatatgtgtgttatgtctgtgacaatccaccaggtgtgagggacagctttaagtttatcc atgagcaggactggctgaggaatggtcagatggctcactttaaattcttacacaatcaggaggtagacgagagtagatgc cgaactgtacaggccacacacggactcgtctcggatgtcatcaatatgggggccgtccttcaaagcctcaaacagaaata taaaatagcaagggataaggacaaaactaaccctgagttgaggaattggatccagaatttggatttagtcgagccagatt cagacgatgatgagactgatgatgattcggctacggaggaggatataagatctcgacatgaagaagatatggagacagaa acagaactatcagtgaccgataataacacgtcggggattgagaatgagtctattgagaaactgtcatctttaaccgagtc gaaggattcaggagagactgaaggttctacagcagaggaaaaagatacgacagcagagaaaactgcagaagactcaaatt ctcaaagtaatatttctcatactgaggaattgaatgagaaaaattcaaatttagtcaacaattctgaatctgtacaggat tctgagtctgtaaacaatatatcttcagcaggtgcttgtccgagtaatgattctagtgagcaaaaaacagaggaaagttc tgtgacgataaatgacagtattgaggaaaataaaaagaggacatttccttacgagatgacgataattctgacactctga |
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Protein
| Protein ID | pfu_aug1.0_322.1_14977.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_322.1_14977.t1 MKTPRKRGGVKTNQSQTLEIHREGKILGEENESLLQSSPPPGSIPSVSLQTTPEDPDPPGSEGGSSRGSSERGTPVKYRR GSRLSDSFQDNASTCSSTSSVGGSASKTMNNSKFPVRPGISWKKGERVEAMDFMNKWYPAKIVDIEEDEQSVMIHFDGWN SRYDEWVPMTSEKLRPRVRYSSRKDKPRHGKIEIVHVLPKDEKKRSGETEVTGKRRSSSVYSRRSVDEAEGGDREMVETV EKVKAVQKRKSSGSRERKKKDSSKSATMSRVPSTETLIANVTESRGDEEMVEGVMSPSGTDPAYADPGVKQTLSYEEDEG AVSGCIQADLQEEKQEVAEESKEIMESPSEQMTDANAISVKTDLSTTIPASPASTLSDKKAKKEVISPSISESSVGSHTE SAEALNRKRSKSSFEKSYPSALSSDLALSRKRSRSATTERSKGIGNYILVPETEPPPKAFVVEQEHNHYKCTFEGCNKGF RKESLLDYHLKYYHSNDGKPVQIPPPRKRRKTSSIFTDEHLDEESNRQRTISQNTMVTEDVMETDAEDTLSKDEVVNCIC GFYEENGLMIQCDVCLCWQHAACFEITEATLPKKYVCYVCDNPPGVRDSFKFIHEQDWLRNGQMAHFKFLHNQEVDESRC RTVQATHGLVSDVINMGAVLQSLKQKYKIARDKDKTNPELRNWIQNLDLVEPDSDDDETDDDSATEEDIRSRHEEDMETE TELSVTDNNTSGIENESIEKLSSLTESKDSGETEGSTAEEKDTTAEKTAEDSNSQSNISHTEELNEKNSNLVNNSESVQD SESVNNISSAGACPSNDSSEQKTEESSVTINDSIEENKKRTFPYEMTIILTL |
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