Gene
| Gene Model ID | pfu_aug1.0_3229.1_51940 |
|---|---|
| Locus | scaffold3229.1 : 1 ... 21064 : + |
| To GenomeBrowser | scaffold3229.1:1..21064 |
| Genes list of scaffold | scaffold3229.1 |
| Synonym | pfu_aug2.0_2109.1_32048 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3229.1_51940.t1 | 1 | 1 | RNase_T | 1 | 155 | 2.6e-22 | 79.8 | 2.0e-26 | 3.0e-22 | 79.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3229.1_51940.t1 | gi|224058011|ref|XP_002190758.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3229.1_51940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3229.1_51940.t1 gagataatagaatttcccgtactgaaactgaatactgcaacatatacagttgaagcacagtttcatgaatatattcagcc aagggtacataaaaatctcactgatttttgtacagagttgacaggcataactcaaggtatggttgatgttggtattgaca ttgaggatgtattgaagagatttaatcaatggatgatggataatagattactggaagaagatgctagttatgcctttgtc acatatggtgactgggatctcaacacaatgttaccacataactgtgattatttcaaattacctgtccaaggttacttcaa gaagtggataaatgtcaagaagtgtgttgccaaggcaactggcaaatatcctggaggaatgatgggagcattaaaacagc tgaaactgactcatactgggcgtcatcactctggtattgatgactgtaagaacatttcaaatatagtagtggagttaatg aagcgtggctatatttttgacatcactggaagcaggtga |
|
Protein
| Protein ID | pfu_aug1.0_3229.1_51940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3229.1_51940.t1 EIIEFPVLKLNTATYTVEAQFHEYIQPRVHKNLTDFCTELTGITQGMVDVGIDIEDVLKRFNQWMMDNRLLEEDASYAFV TYGDWDLNTMLPHNCDYFKLPVQGYFKKWINVKKCVAKATGKYPGGMMGALKQLKLTHTGRHHSGIDDCKNISNIVVELM KRGYIFDITGSR |
|