Gene
| Gene Model ID | pfu_aug1.0_3232.1_37537 |
|---|---|
| Locus | scaffold3232.1 : 17750 ... 29735 : - |
| To GenomeBrowser | scaffold3232.1:17750..29735 |
| Genes list of scaffold | scaffold3232.1 |
| Synonym | pfu_aug2.0_3502.1_09161 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3232.1_37537.t1 | 1 | 1 | DUF4518 | 40 | 320 | 0.0 | 214.5 | 0.0 | 0.0 | 209.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3232.1_37537.t1 | gi|47507519|gb|AAH71050.1| | LOC432062 protein, partial [Xenopus laevis] | 6.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3232.1_37537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3232.1_37537.t1 gtccatgtcgacctgaaaaaaaaggagaaattaaagaataaaggagaaagaaattttaaatggaaattcgccgggagtcg aacccggatcgacggattgcaaaacgagaatgcaccgcaccaggctaaggaagccgttaaagccatcatcgcatgtagta gttcagcagaggagatctttggtagacagaaaataacaaagaaatgcatagttaactatttggttgcaaagaatattaat ttctctgccaagtggaataagagtgagttatgtgccaaagtgttggaatattggaagcaccagtacgagatgacatgtgc acagggttcatctacccctgcgtcaccagaacaaagtaggcacgttaatccgccagaagcaggtgctcctcatcaagtag tctaccaaacatcaccaggtccagtaacacacatcgtgaataactacagtacagtgtacaaccaagtcattatctcccct ggggcagaaaaatccacaaccggtggtggagaatccacatctgtcataaccaatccacaccttcaacaattaggagagac atttaccaagtggttctatgagcgctggaatgccgaaaatccatcagtgtcttatgcagtaaatgactttggaactcatc acttctgggatgatgctagtctactttcactttgccttactccggagcgcattgaggatcagtgtacgggatctgcagca gtatcagaaaaattgttatcttttgttagggatcagcaacttatgtttaatcccaatctgactgctgagggtataaaggt taaatctgacccacacggattagtgattatactagtgtgtggtactgtacatcaatctaatagatttgttggtatattcg atcaaatgtttggtttaattaaagatcctgctatgaatgacaattggagaatcaaagtcatgaagcttaaaataagtgtt accagtgccttctcaatgccaaaattatcggataaaagctacgaggagattcaggatcttgaaagagtatga |
|
Protein
| Protein ID | pfu_aug1.0_3232.1_37537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3232.1_37537.t1 VHVDLKKKEKLKNKGERNFKWKFAGSRTRIDGLQNENAPHQAKEAVKAIIACSSSAEEIFGRQKITKKCIVNYLVAKNIN FSAKWNKSELCAKVLEYWKHQYEMTCAQGSSTPASPEQSRHVNPPEAGAPHQVVYQTSPGPVTHIVNNYSTVYNQVIISP GAEKSTTGGGESTSVITNPHLQQLGETFTKWFYERWNAENPSVSYAVNDFGTHHFWDDASLLSLCLTPERIEDQCTGSAA VSEKLLSFVRDQQLMFNPNLTAEGIKVKSDPHGLVIILVCGTVHQSNRFVGIFDQMFGLIKDPAMNDNWRIKVMKLKISV TSAFSMPKLSDKSYEEIQDLERV |
|