Gene
| Gene Model ID | pfu_aug1.0_3247.1_59179 |
|---|---|
| Locus | scaffold3247.1 : 36906 ... 39308 : + |
| To GenomeBrowser | scaffold3247.1:36906..39308 |
| Genes list of scaffold | scaffold3247.1 |
| Synonym | pfu_aug2.0_1904.1_15302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3247.1_59179.t1 | 2 | 1 | RVT_1 | 366 | 528 | 1.1e-27 | 96.7 | 2.2e-30 | 1.1e-26 | 93.5 |
| pfu_aug1.0_3247.1_59179.t1 | 2 | 2 | RVT_1 | 528 | 560 | 1.1e-27 | 96.7 | 0.034 | 170.0 | 1.4 |
Transcript
| Transcript ID | pfu_aug1.0_3247.1_59179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3247.1_59179.t1 atgatggatgtccgccagagtgaaacagagacagtggaggagtattttcaccgagtaacctccagtttggcagacagacc gatagatgaggactggttaattcactcccttgtaaccggactaaaacaggcaatcaagaaacctgtcgttcaagcggatc cacaaacattggaacaacttagaaatgaggcaattaaggcagaaatggcagaaaaactcgcaggtggaagtggacattac attacaacaagtgaacgttcagaacaatcaaaacttgacactatattggacaagataaatagcattgatgtggcagctgt ccagaagaatagggatccgtgcggaaattgtggtgtagattttcttagtacatacaatgttagattgcgtttttcacagc agaataccttggaaatcccagatggcagtgaaccaaaggtttgtgtggttaaagttagtactggcttagctagaactgca aatgcaattacaattccaaaaaaatcagaaattaatataccagttttggtatcacgttgcaaaacaggcgacgaagtgct tttggaaccacggcaaaatttggcaaaattgcacttaatagcagccaaatgtttggttaaagtgcagaagggtaaggcag tcatgcgattgcttaatcctaccaatagtgacattgaattaaagaaaagccatgtactagcttcagtcacagatatccac agtgctcaagtataccctattgaggactcccatagtgcttccttatttgtaggttctgttaacactgatacagtgctaga aactgacatcaagtttgatctctctgattctgaattcacagagcatgaaaaaactgaatttttggcatttttggctagac acaggagtaattttgcaactgacctgagtgaattaggcaagacaaatgtccacaaacatcatattgaaattcaacctggt tccaaaccagttcggttgcaattttaccggacgtcacttcagaattcaaaagaaatttcaaggcaaattgatgatatgga aaagcatggtattataaagccttcgaattctgagtggcattcgcctgttgttctggtaaagaaaaagaatggcactttcc gatttgcatgtgattatagagctctgaataagataacagtgcccatgtcttttcccttacctcacatggaaagtgtcttt gatacaataggggcagccaaagcaaattatttttcaaaattagatttgatgtcaggcttttggcaaatggagctcgacga ggaaagcaggaagaaagcagctttcataacacaaaggggtgtgtatgaatggaccagaatgccatttggtttaactaatg caccaatttcctttcagactttgatgtcgtcagttctgcgtgacctgaactggaagtcagtgctagtgtatgtggatgac attttgattttcagtaattccttccaagagcatttagctcacttagaacaagtctttgataggttaagggaggcaaatct aaaactgcacccttcaaagtgtcatttcgccatgaaacagctcaacttcctaggtcatattatatcacgcaatggtgttg aggtagacccagagaaaacaaaggctatgagtgaatttcccacaccaaggacgcaaaaacatgtgagaagcttccttggt atggcaaattactatagaaggttcataaaggacttttcgaaaattgcaacaccactcaatgcacttttgaaaagtacatg caataaaaagtttcagtggagcgaggagtgtgaacaagcatttcaaacactcaaggctaa |
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Protein
| Protein ID | pfu_aug1.0_3247.1_59179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3247.1_59179.t1 MMDVRQSETETVEEYFHRVTSSLADRPIDEDWLIHSLVTGLKQAIKKPVVQADPQTLEQLRNEAIKAEMAEKLAGGSGHY ITTSERSEQSKLDTILDKINSIDVAAVQKNRDPCGNCGVDFLSTYNVRLRFSQQNTLEIPDGSEPKVCVVKVSTGLARTA NAITIPKKSEINIPVLVSRCKTGDEVLLEPRQNLAKLHLIAAKCLVKVQKGKAVMRLLNPTNSDIELKKSHVLASVTDIH SAQVYPIEDSHSASLFVGSVNTDTVLETDIKFDLSDSEFTEHEKTEFLAFLARHRSNFATDLSELGKTNVHKHHIEIQPG SKPVRLQFYRTSLQNSKEISRQIDDMEKHGIIKPSNSEWHSPVVLVKKKNGTFRFACDYRALNKITVPMSFPLPHMESVF DTIGAAKANYFSKLDLMSGFWQMELDEESRKKAAFITQRGVYEWTRMPFGLTNAPISFQTLMSSVLRDLNWKSVLVYVDD ILIFSNSFQEHLAHLEQVFDRLREANLKLHPSKCHFAMKQLNFLGHIISRNGVEVDPEKTKAMSEFPTPRTQKHVRSFLG MANYYRRFIKDFSKIATPLNALLKSTCNKKFQWSEECEQAFQTLKA |
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