Gene
| Gene Model ID | pfu_aug1.0_3257.1_08574 |
|---|---|
| Locus | scaffold3257.1 : 47315 ... 59305 : - |
| To GenomeBrowser | scaffold3257.1:47315..59305 |
| Genes list of scaffold | scaffold3257.1 |
| Synonym | pfu_aug2.0_2655.1_18887 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3257.1_08574.t1 | 2 | 1 | zf-B_box | 16 | 56 | 2.2e-13 | 49.8 | 8.6e-07 | 0.0016 | 18.2 |
| pfu_aug1.0_3257.1_08574.t1 | 2 | 2 | zf-B_box | 69 | 104 | 2.2e-13 | 49.8 | 1.2e-12 | 2.3e-09 | 36.9 |
| pfu_aug1.0_3257.1_08574.t1 | 4 | 1 | NHL | 334 | 349 | 9.0e-07 | 28.5 | 0.021 | 39.0 | 4.4 |
| pfu_aug1.0_3257.1_08574.t1 | 4 | 2 | NHL | 426 | 440 | 9.0e-07 | 28.5 | 0.0023 | 4.2 | 7.4 |
| pfu_aug1.0_3257.1_08574.t1 | 4 | 3 | NHL | 464 | 475 | 9.0e-07 | 28.5 | 0.23 | 420.0 | 1.2 |
| pfu_aug1.0_3257.1_08574.t1 | 4 | 4 | NHL | 509 | 524 | 9.0e-07 | 28.5 | 0.0008 | 1.5 | 8.9 |
Transcript
| Transcript ID | pfu_aug1.0_3257.1_08574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3257.1_08574.t1 atggcattttcgaaatcggttaacctgtcgcatgcccaaacacctgtaccatgtgatgtctgtgaagacaaaactcccgg agaatactactgtatagaatgtaaacataccctctgtcctccatgtgagaaatatcatagaacgttcaccaaaggtcaca atgttgtactaaggacccaagtaggtgacatagataccacagtcttgacctgtactgaccacggagaccaagcctcattt cactgtgagaaatgtaacgtaccagtctgtggtaaatgtatcactggcgaacacagagggcatgagatgtctgacctgac tgagctttttgacagggaaaagaaagtcctgcaacatgatatcaccagaatggaagacattttgagtaaatcaaaaaaac aaagagaagaaattaatgtggagaaaaaaaagtatgacggcaaaatacagaaaacaaccacagatttggaaactgagaag aagtctgccatgaaagagctggatagaatttataacaataaaatgaaagacctagccaccatccgacaaaaacactcatc aatctttgaggttcgcactacagaaatcaggaacagaatggatacacttgaggaaagaataaaagagtacaagaaagcca tgaatacaaacagccttccagccttaatccaactttcgagaagaaaggagtcgatcccagagataggcagtaagccagaa ataccagaaccccctgtgtttgtatctgggagcctacagaaactaggagaaaatctaggaaaattacaggtatcctcttc ttcagtagaagcaaaaccaaggagaaatccattgaaacttacaaaaccgactattgtatcaaaattcaaatgtccatcga agggagacccatctatatgtatcagcaaggaaggtgacgtgtggcttggtggacttgaatctagagaactggtaatggtg aacatcaaaggtcatgtacttaagaggaggacgatacagaacagacctaaagcactggctgtgatggactgtggagatgt catcataagcccaaatagtaatgattccatggcaatcagcagatgtctaagagatgggacagaacaacagatttttgatg aaacaccgtcttatttagtgtccatcaccgctgaccagaagatactgatttgtacagaagatgggagagtagtgaggatc aatggtgacgggtctaatatcaaacaaatttatacgggctctggttataactcagctatacatgctgtagaaaatgctga tggaaacatttacatcagtgactataacaagtcagctgttgtgatgatcaccaaagatggcaaggtcttgacaacaataa cacaaactgtagaaggagaaaaattaatatggccaataggattagtggtagacaaaatgggtaacactttatgtacagat gatcattttgaaaagggttgtttgtatatcattaatcagaaagggcagatgaggaaattgatagatagttcgtttgacca ccaggagcctcgctttctggctgtggataatgacaacaatctgtggataacacattacgatggaactgtccttgttgtga agtacctatcttga |
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Protein
| Protein ID | pfu_aug1.0_3257.1_08574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3257.1_08574.t1 MAFSKSVNLSHAQTPVPCDVCEDKTPGEYYCIECKHTLCPPCEKYHRTFTKGHNVVLRTQVGDIDTTVLTCTDHGDQASF HCEKCNVPVCGKCITGEHRGHEMSDLTELFDREKKVLQHDITRMEDILSKSKKQREEINVEKKKYDGKIQKTTTDLETEK KSAMKELDRIYNNKMKDLATIRQKHSSIFEVRTTEIRNRMDTLEERIKEYKKAMNTNSLPALIQLSRRKESIPEIGSKPE IPEPPVFVSGSLQKLGENLGKLQVSSSSVEAKPRRNPLKLTKPTIVSKFKCPSKGDPSICISKEGDVWLGGLESRELVMV NIKGHVLKRRTIQNRPKALAVMDCGDVIISPNSNDSMAISRCLRDGTEQQIFDETPSYLVSITADQKILICTEDGRVVRI NGDGSNIKQIYTGSGYNSAIHAVENADGNIYISDYNKSAVVMITKDGKVLTTITQTVEGEKLIWPIGLVVDKMGNTLCTD DHFEKGCLYIINQKGQMRKLIDSSFDHQEPRFLAVDNDNNLWITHYDGTVLVVKYLS |
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