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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3261.1_16056
Locus scaffold3261.1 : 1 ... 29679 : +
To GenomeBrowser scaffold3261.1:1..29679
Genes list of scaffold scaffold3261.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3261.1_16056.t1 2 1 Nop52 20 47 3.7e-11 42.8 3.9e-14 5.8e-10 38.9
pfu_aug1.0_3261.1_16056.t1 2 2 Nop52 136 168 3.7e-11 42.8 0.018 270.0 0.8

Transcript
Transcript IDpfu_aug1.0_3261.1_16056.t1
Definition-
>pfu_aug1.0_3261.1_16056.t1
tatattattttcatattttctcacctgaatctatggacgaattagaaaagggaagtttcacagaagaggattttctaaag
ttatggaaaggtttacactactgtatgtggatgcaggacaagatggttatacagctccacctacggtacatgtacagcac
agttctagtaaatcgtgtgatttctcgaatcttcgatgctatagtagaacagtcagttagtgatgccatggaggcagcta
caaaacaactagagtttgaaggtgaccaggaagtccaggaagaatcagaagaaatgttagaactggaagatttagacatg
ccacccagacttgagtttgacttctgtaaaatagcagatcgcctgtttgagattggcaaagatgagaagtgccttagtag
aaacagagctttgatttatgcatgtgtcaagaagtcctgggatcaaaacctcagacatgcctacagagttgttgaaatat
tttctaatgaaccggtctttcggaccggtactagtcctaaatcaaccggtccgaaagaattttaa

Protein
Protein IDpfu_aug1.0_3261.1_16056.t1
Definition-
>pfu_aug1.0_3261.1_16056.t1
YYFHIFSPESMDELEKGSFTEEDFLKLWKGLHYCMWMQDKMVIQLHLRYMYSTVLVNRVISRIFDAIVEQSVSDAMEAAT
KQLEFEGDQEVQEESEEMLELEDLDMPPRLEFDFCKIADRLFEIGKDEKCLSRNRALIYACVKKSWDQNLRHAYRVVEIF
SNEPVFRTGTSPKSTGPKEF

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