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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_32620.1_62712
Locus scaffold32620.1 : 17002 ... 18933 : -
To GenomeBrowser scaffold32620.1:17002..18933
Genes list of scaffold scaffold32620.1
Synonym pfu_aug2.0_448.1_27402

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_32620.1_62712.t1 1 1 Tim44 10 92 2.1e-14 53.7 3.9e-18 2.9e-14 53.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_32620.1_62712.t1 gi|157131210|ref|XP_001655824.1| AAEL012025-PA [Aedes aegypti] 2.0e-38

Transcript
Transcript IDpfu_aug1.0_32620.1_62712.t1
Definition-
>pfu_aug1.0_32620.1_62712.t1
atgactcatggaatggaaaagaaaacattacgatggaagtttgtagaatccgttgaacctccacgacttgtccaagctcg
gacgatggaggccatcttgaaaaagaattactatgcccaagtcactgtgaggtttcataccaaacagataatggcattgt
acgatcagttcggtcgactaatgtacggaagtaacagcatagtcaagaatatactagaatacattgtgtttgagaaacat
atttccaatgtgtatggtaactggcgaattcactctaagattgtacctgattggatgccagagggagatcctatcgtcaa
aaccttcattttagatcgtcctgagaaaccgccagaaaaagaggaagaggaagttttgagccaggaagccaaagagggag
agaacgaagcaaaaggcaaagatcaaccaattgcagcatag

Protein
Protein IDpfu_aug1.0_32620.1_62712.t1
Definition-
>pfu_aug1.0_32620.1_62712.t1
MTHGMEKKTLRWKFVESVEPPRLVQARTMEAILKKNYYAQVTVRFHTKQIMALYDQFGRLMYGSNSIVKNILEYIVFEKH
ISNVYGNWRIHSKIVPDWMPEGDPIVKTFILDRPEKPPEKEEEEVLSQEAKEGENEAKGKDQPIAA

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