Gene
| Gene Model ID | pfu_aug1.0_3265.1_23265 |
|---|---|
| Locus | scaffold3265.1 : 17116 ... 32258 : + |
| To GenomeBrowser | scaffold3265.1:17116..32258 |
| Genes list of scaffold | scaffold3265.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3265.1_23265.t1 | 2 | 1 | PIF1 | 79 | 139 | 5.9e-15 | 55.0 | 9.4e-16 | 6.9e-12 | 44.9 |
| pfu_aug1.0_3265.1_23265.t1 | 1 | 1 | AAA_30 | 80 | 192 | 8.9e-06 | 25.4 | 5.9e-09 | 4.4e-05 | 23.1 |
| pfu_aug1.0_3265.1_23265.t1 | 2 | 2 | PIF1 | 206 | 247 | 5.9e-15 | 55.0 | 0.00015 | 1.1 | 8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3265.1_23265.t1 | gi|169614622|ref|XP_001800727.1| | hypothetical protein SNOG_10457 [Phaeosphaeria nodorum SN15] | 7.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| egg-4cell | 4 |
| 8-16cell | 2 |
| egg-Dshape | 3 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3265.1_23265.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3265.1_23265.t1 atgtttacagatacgaaactaagacaagcagaggacttccgaactataaaggaaaagtctagaaattccgcgaaatttgt agaaagtgaaaccatggacgacaggcagatgaaagcgcaagatcttgctctgagaggacataatattgtcataacaggtc aagggggattagaggatggtagacaccagaataaccagttactgcatttgatacagactgacgagcgattcctaacagcg aagtcaaatattcttaatactgatgtattgattattgatgaagtttcaatgctgagttccaaagttcttaaacaaattga atatgtgtgtcgaggagtgagggaaaaggaaaaatactttggtgggatgcaagttgtactgtctggaaacttttaccaat tacaaccggttaaaaatgagctgtatggggattttggacacccgtgtttccaggttgcctggtttgatgatttatttcca cacagaataaatttgaatgttatttatagacaaagtgaagtgaaattgatcaaagcagttcatgaattagaaactggaca tctgtcagaggaaacaaatatattaatgaagtcactaagtagggacttgcctcctgatcagctagtaaatgcggtccatt tatttaccataaatgttgatgttcttctgtttaactatattaaactcaaacaattacatggacagctacacacttttgtg tccgaggatgaaggaaaggaacaaattaagaagaaatttactgagctgtttgaccttgaatctgatgaaaaacatattga tactgattcgtctactccgctgtgtaattcatgtgaaacatgcaaagtgatagaactacttcatgatagtaccattcgct tatttttgaaagtttccatcagtcaatttcgaaagagcttcttaacggcacttaagattgagaagagtaaagcactaaga acgaagccagtacgaaagatcccagtaacaggtacgaaagatcccgtacgaaaatctcggtacgaaacggtatcggtacg aaagatcccggaaccatatcaacactacttctatgataacatagtaaatgcaaaatattcagtaagtttgaattcaatga cagtactgaagtatcgatattttgagattatcaatacgtatcgatacacaaatgctgattactttcaatacatttga |
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Protein
| Protein ID | pfu_aug1.0_3265.1_23265.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3265.1_23265.t1 MFTDTKLRQAEDFRTIKEKSRNSAKFVESETMDDRQMKAQDLALRGHNIVITGQGGLEDGRHQNNQLLHLIQTDERFLTA KSNILNTDVLIIDEVSMLSSKVLKQIEYVCRGVREKEKYFGGMQVVLSGNFYQLQPVKNELYGDFGHPCFQVAWFDDLFP HRINLNVIYRQSEVKLIKAVHELETGHLSEETNILMKSLSRDLPPDQLVNAVHLFTINVDVLLFNYIKLKQLHGQLHTFV SEDEGKEQIKKKFTELFDLESDEKHIDTDSSTPLCNSCETCKVIELLHDSTIRLFLKVSISQFRKSFLTALKIEKSKALR TKPVRKIPVTGTKDPVRKSRYETVSVRKIPEPYQHYFYDNIVNAKYSVSLNSMTVLKYRYFEIINTYRYTNADYFQYI |
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