Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_32690.1_19463
Locus scaffold32690.1 : 331 ... 6445 : -
To GenomeBrowser scaffold32690.1:331..6445
Genes list of scaffold scaffold32690.1
Synonym pfu_aug2.0_502.1_07595

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_32690.1_19463.t1 gi|260800015|ref|XP_002594932.1| hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae] 2.0e-17

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_32690.1_19463.t1
Definition-
>pfu_aug1.0_32690.1_19463.t1
atggacctatctttagaattcccagaacggtatcagattaccatagataaccccagagctgctcaggacatctgccatgt
tacagaaatgctgcacactttcacagaaatagaaaagcttgatggcaaaatttacaagtgtgaaaaatgcaatggtattt
ggtcacaaagtaagtcaccaaaagtgccagtttactcctatgctcagaaacagtttcttcttggtgatatgccacctgta
cttcgattacatttaaaaagattcaggtattatatagaaatatactcttaa

Protein
Protein IDpfu_aug1.0_32690.1_19463.t1
Definition-
>pfu_aug1.0_32690.1_19463.t1
MDLSLEFPERYQITIDNPRAAQDICHVTEMLHTFTEIEKLDGKIYKCEKCNGIWSQSKSPKVPVYSYAQKQFLLGDMPPV
LRLHLKRFRYYIEIYS

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