Gene
| Gene Model ID | pfu_aug1.0_327.1_50807 |
|---|---|
| Locus | scaffold327.1 : 141416 ... 163865 : - |
| To GenomeBrowser | scaffold327.1:141416..163865 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | pfu_aug2.0_1480.1_01655 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_327.1_50807.t1 | 2 | 1 | SNF | 50 | 293 | 0.0 | 242.9 | 0.0 | 0.0 | 206.6 |
| pfu_aug1.0_327.1_50807.t1 | 2 | 2 | SNF | 292 | 326 | 0.0 | 242.9 | 4.6e-14 | 6.8e-10 | 38.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_327.1_50807.t1 | gi|198435741|ref|XP_002131725.1| | PREDICTED: sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_327.1_50807.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_327.1_50807.t1 atgataaaagtcgggtcagttagttcaatgagacgtatacacaggacaaataaatattacgttatacagagtgacaaaca actgggccatgacaccaacggatccgtgacggttgttaatggcgacggccgggaagaagaggaagatagaggccagtggg gctccaaatgggagttcatcttgtcgtgtgtagggctctccgtggggctggggaacgtttggaggttcccatacctggct tacgataatggtggagctgcctttgtcattgcttacttgatcctgcagtttctgatcggtaagccaatgtactttatgga gctcgtgatgggacagtactctggcaagggacctacagctgtttggaatatgaacccgagtgctaaaggaattggtgttt ccatggccctcatatccctgatcgtggccatttactataacgttatcatggcctatacactgttctacttcttctcatca atgcagaccaacctaccgtggatgcagtgcaaagatgaatggtatcaatatgggtgcgttgagaagaccacaccgaacat accatactgttcgttcaacatgtccgtaaactacgaaaaattcaacgacacagcttgtaggtgttttgagaacagtacct ttcatatgagcagctatcttgacccattaggattcaactgtaccaatacaacatggaaaggggacgaaccagtggctgtg gctcagttgttcttcgacaaagcggttattgaaaaggcacctacgctgaagattgacgagatgggggcgccactgtggaa gctatcgctgtgtctgctgctttcatggatagtcgtcgtctgctgtctaatcaggggagttaaatcatcaggaaaggtat gggtggctgctgcgggacagatgtttttctctctaagcgtgtcgtttggaggaattatcatgtttggaagctacaacaaa tttagtaataatgtttatggatggcgctaccgaaatgaatttatgaaacgctga |
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Protein
| Protein ID | pfu_aug1.0_327.1_50807.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_327.1_50807.t1 MIKVGSVSSMRRIHRTNKYYVIQSDKQLGHDTNGSVTVVNGDGREEEEDRGQWGSKWEFILSCVGLSVGLGNVWRFPYLA YDNGGAAFVIAYLILQFLIGKPMYFMELVMGQYSGKGPTAVWNMNPSAKGIGVSMALISLIVAIYYNVIMAYTLFYFFSS MQTNLPWMQCKDEWYQYGCVEKTTPNIPYCSFNMSVNYEKFNDTACRCFENSTFHMSSYLDPLGFNCTNTTWKGDEPVAV AQLFFDKAVIEKAPTLKIDEMGAPLWKLSLCLLLSWIVVVCCLIRGVKSSGKVWVAAAGQMFFSLSVSFGGIIMFGSYNK FSNNVYGWRYRNEFMKR |
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