Gene
| Gene Model ID | pfu_aug1.0_3272.1_01386 |
|---|---|
| Locus | scaffold3272.1 : 8455 ... 10735 : - |
| To GenomeBrowser | scaffold3272.1:8455..10735 |
| Genes list of scaffold | scaffold3272.1 |
| Synonym | pfu_aug2.0_5950.1_02798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3272.1_01386.t1 | 2 | 1 | zf-CCHC_2 | 80 | 102 | 4.4e-06 | 26.0 | 1.7e-06 | 0.0036 | 16.7 |
| pfu_aug1.0_3272.1_01386.t1 | 2 | 1 | zf-CCHC | 84 | 99 | 9.3e-17 | 60.0 | 4.0e-11 | 8.4e-08 | 31.7 |
| pfu_aug1.0_3272.1_01386.t1 | 2 | 2 | zf-CCHC_2 | 100 | 124 | 4.4e-06 | 26.0 | 9.7e-06 | 0.02 | 14.3 |
| pfu_aug1.0_3272.1_01386.t1 | 2 | 2 | zf-CCHC | 107 | 123 | 9.3e-17 | 60.0 | 1.8e-11 | 3.8e-08 | 32.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3272.1_01386.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3272.1_01386.t1 atgacttctcaacaagttgctgatattgatttaaccaactttgaatttcaatggccaaacggcaatgtacaacagcctgc agacaacaaaatggacgacatccatagcaattgtcagcgcatgactgccatgatggaagatgtacagacatccatttcca agatgcaagccgacatccatacattgatggataacaagagaaatgcagaagaaggagacgaaccacccaagaagaaagcc agatacgtatgttacaattgcaatgaagagggacactttgctaccgaatgtcctcagccgcccaagaaacagaacgacat ttgctacaagtgccaaggcacgggacactgggccagagactgtcctgaacaacaggaatacaacacgtatccgggaccca acaactatggacctaacaactacaggccaaattaccccagacccatctatggagcaaacagaggacgacccatctatgga gcaaatagaggacgcccacctatggcgagtcagaatgtgaggccacagtacagtgcatag |
|
Protein
| Protein ID | pfu_aug1.0_3272.1_01386.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3272.1_01386.t1 MTSQQVADIDLTNFEFQWPNGNVQQPADNKMDDIHSNCQRMTAMMEDVQTSISKMQADIHTLMDNKRNAEEGDEPPKKKA RYVCYNCNEEGHFATECPQPPKKQNDICYKCQGTGHWARDCPEQQEYNTYPGPNNYGPNNYRPNYPRPIYGANRGRPIYG ANRGRPPMASQNVRPQYSA |
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