Gene
| Gene Model ID | pfu_aug1.0_3272.1_01388 |
|---|---|
| Locus | scaffold3272.1 : 12436 ... 31251 : + |
| To GenomeBrowser | scaffold3272.1:12436..31251 |
| Genes list of scaffold | scaffold3272.1 |
| Synonym | pfu_aug2.0_15.1_16694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3272.1_01388.t1 | 2 | 1 | DNA_pol_B_2 | 42 | 76 | 1.3e-20 | 73.4 | 0.00035 | 5.2 | 5.6 |
| pfu_aug1.0_3272.1_01388.t1 | 2 | 2 | DNA_pol_B_2 | 601 | 1074 | 1.3e-20 | 73.4 | 2.6e-22 | 3.8e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3272.1_01388.t1 | gi|115916369|ref|XP_001201156.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3272.1_01388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3272.1_01388.t1 atgttccaacctaccgggaggcggacgcgaagtcattttaagggggagactaccttggaccaatttatggtttggttgtt caacacctgttccagtgacgataaacacaagaaaatgtgtcatgagggagccacagccatcgctcacaacatgaatggat acgacggccaattcatactacacttcttggtcaaccgagcctgtatcaaaccagatacgtttgacgatttgagtgctttc gtgtttaaacaccaatttaccatggtggtagccggaccatgtcgttccggtaaaaccgaatttgtcaaacaattggttcg atacaaggacgaggtcattcatcctcctcctcaaaaagtagtctggtgttatcgtgaatggcaaaaagcttacgagagcg acttctattctggaaaatacgtaggaagtaacatggcgagtgggcctgtctatgaagatactggatctgtaaaagttcct catcctgctcgcttagatgcattaatagaggccttagaacttttatcttattgtaacattatcaaacaagttgggtccgg gcctacagcttacactttcaaagaaaagtctgtacggtcatttttaagtacccgagccaaggaaacaaccatagaggtaa cctttaatccatcctggcaaggaaaacaactcctggacctccattacgaattgtttgacatgttccaagaggtgcttgat tttactttcaaagactaccaaccgaacgacctaggtcgtgtagtcattcatcatgacgcggttgaccccatcgttgtcct cttaatgaaagtagaggaacttaccacagacctcatcatggaacatctcatcaacgttctgaatagccatcaagaattga ccttaaatactaccttcaaaatttcagttgcaatcatttctatgcctagaggtgcaggtcgggtttacaccaccaagctg cgaggggagaacaattccattgcccggaaacgctccctcgtacaaattgtcaatgatgacaatttgtgtatgaccagggc aattgctgttgcatgggccagtaaacaaatatgcgggaaagaagaatgggaggaactaacaagaaaccgcgtcagaggcc agtccaacatagatttcatcctcacccaccgaaagatgccaaggacccattacactcacgtcaggaccaagggttccaag gcacaatgtgaactggcagaagccctgtgccatctgtcaaaggttcctttgaacaggaaaggttgcatcacagaccttcg agattttgaaaaagttcttaaagtcaggattctggtcatcgactcctccatcggtaacagatttagttatgtcggcacag gtggtgaccaagacgtctatctatatatggttgatcaagaccatttccatgccattgtctcaatcaccggtttcttcagc cgcagctacttctgccaaacctgtctcaaaccatacacaaatctggataggcatctgtgtgaaagactttgttcgatatg caaagagagccattgtacagaaagcaacacacccgtttcatgtcttagctgtaaaatggagtgccgctccaaagaatgct acgacaggcacaagatgaagccctccgaaaaagaagagcggatatcaagacaaaccattgatgtcagtgaatgtaaaaaa tactggaagtgtacagcttgctgcaacgtggtcaaaagactggacagggatataaccaaaacagaaaaccttttctggaa ggaatgccagccaggagttttgtctttggctcttcaccgagcaactgtggtggccaataacatgaaaggttatgatggcg tcttcctccttggttatatgctgcgaaatagcataattcccaagaccgttatatacagtggctccaaaattatgtatatg tacgtacaaaagggaatggaactgcggttcatcgattctttgaatttctttcaaatgcctctcgccaagttaccagacgc ctttgacctgcgtgtggaattggaaggggatgcagaattaaggaaaggatactttccccattactttaatgtacccgaga acgtcaactatgtgggtccctatccggaagctaggtactatggtgcagacagcatgcctacgggtcctcgtcaaaagatg ttggatttgttgcaacagaagagggattcgggagccgtctttgacttcgctaaagaaatggatgcatactgccgaagtga cgtcaccattctaatgcaggcatgcatcaaattcaaaagtttgatgaagacagccacaaagggaatgatcgaccccttcg attctatcaccattgctggaatgtgcctaaacaccttcaggacatgctttctgcaagaagaatggaagatacaacttcac caaaagacagaattggtccaagataccagagatgagggtaggcaaattcattatcaaggtcgatggtatacccaacagca actcttggaggaagccaacctcgtgccgactctacgggtcaacccgaccccatcgcaatttgggatggtttcctgcttcc atgcaagctggagagatgactatccactgaagtttgcattgtgcagagtctgtgcagagaaggaacaggacatgccctgc cagcacacggacgaagagaggtgttttgtggggacatggaccacgccggagctagccaaagcactggagaaggaatacca gatcctcaagatttaccaggtgtatcattggcccaagaccacccagtacgatccgactctcagagagggaggtctttttg caaagtacataaacaccttcctaaagttaaagcaggaatccagtgggtttccgtcttggtgcaaaactatggcagactgt aaaaagtatgtagaacaatactttgcacacgaaggcatacagcttgattgggattttattgaaaagaacaaagggttacg ggccttagccaagctgtgtctcaattctctttggggtaagttgggacagcgaaacaacatgatgtcatcacgctactttt ttaaagatcaggtcgatgatttttaccagctcctaaccgaacggaccaaggtggtacagaatcttaacatcatgaacgaa gagacagtccacgtgtcttacgtcagctcttcagagttttctactgtcagtacaaatacaaacatctacttggcaacctt cactaccgcatgggctcgtttgaaactgtacgactctccgggaagacgtgttgtaccaagacacggacagtgtgatctac ctttgtcggcctggggaaaacgagcgtccataaggagactacctgggagaactgaccgacgagttgcaggattgatcaac tttgcaattattaaagcccttttgatgcccgaaaatctggaggagagatccgaacccttaaacaaaaggcgaaagatcga caccctcaacaaccgaaaaattttcagggataaagccaaaaatgtgatttataatcgcccggagaaaaagatgtatcgcg tggtctataccaaacgggcacttgacctgagcacaatgaaaacattaccctattga |
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Protein
| Protein ID | pfu_aug1.0_3272.1_01388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3272.1_01388.t1 MFQPTGRRTRSHFKGETTLDQFMVWLFNTCSSDDKHKKMCHEGATAIAHNMNGYDGQFILHFLVNRACIKPDTFDDLSAF VFKHQFTMVVAGPCRSGKTEFVKQLVRYKDEVIHPPPQKVVWCYREWQKAYESDFYSGKYVGSNMASGPVYEDTGSVKVP HPARLDALIEALELLSYCNIIKQVGSGPTAYTFKEKSVRSFLSTRAKETTIEVTFNPSWQGKQLLDLHYELFDMFQEVLD FTFKDYQPNDLGRVVIHHDAVDPIVVLLMKVEELTTDLIMEHLINVLNSHQELTLNTTFKISVAIISMPRGAGRVYTTKL RGENNSIARKRSLVQIVNDDNLCMTRAIAVAWASKQICGKEEWEELTRNRVRGQSNIDFILTHRKMPRTHYTHVRTKGSK AQCELAEALCHLSKVPLNRKGCITDLRDFEKVLKVRILVIDSSIGNRFSYVGTGGDQDVYLYMVDQDHFHAIVSITGFFS RSYFCQTCLKPYTNLDRHLCERLCSICKESHCTESNTPVSCLSCKMECRSKECYDRHKMKPSEKEERISRQTIDVSECKK YWKCTACCNVVKRLDRDITKTENLFWKECQPGVLSLALHRATVVANNMKGYDGVFLLGYMLRNSIIPKTVIYSGSKIMYM YVQKGMELRFIDSLNFFQMPLAKLPDAFDLRVELEGDAELRKGYFPHYFNVPENVNYVGPYPEARYYGADSMPTGPRQKM LDLLQQKRDSGAVFDFAKEMDAYCRSDVTILMQACIKFKSLMKTATKGMIDPFDSITIAGMCLNTFRTCFLQEEWKIQLH QKTELVQDTRDEGRQIHYQGRWYTQQQLLEEANLVPTLRVNPTPSQFGMVSCFHASWRDDYPLKFALCRVCAEKEQDMPC QHTDEERCFVGTWTTPELAKALEKEYQILKIYQVYHWPKTTQYDPTLREGGLFAKYINTFLKLKQESSGFPSWCKTMADC KKYVEQYFAHEGIQLDWDFIEKNKGLRALAKLCLNSLWGKLGQRNNMMSSRYFFKDQVDDFYQLLTERTKVVQNLNIMNE ETVHVSYVSSSEFSTVSTNTNIYLATFTTAWARLKLYDSPGRRVVPRHGQCDLPLSAWGKRASIRRLPGRTDRRVAGLIN FAIIKALLMPENLEERSEPLNKRRKIDTLNNRKIFRDKAKNVIYNRPEKKMYRVVYTKRALDLSTMKTLPY |
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