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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3272.1_01391
Locus scaffold3272.1 : 40279 ... 50065 : -
To GenomeBrowser scaffold3272.1:40279..50065
Genes list of scaffold scaffold3272.1
Synonym pfu_aug2.0_15.1_16693

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3272.1_01391.t1 2 1 PC4 18 62 1.6e-14 52.8 1.5e-11 2.2e-07 29.9
pfu_aug1.0_3272.1_01391.t1 2 2 PC4 92 125 1.6e-14 52.8 9.4e-09 0.00014 21.0

Transcript
Transcript IDpfu_aug1.0_3272.1_01391.t1
Definition-
>pfu_aug1.0_3272.1_01391.t1
atgaattttgacggattaacgcacatacagtacaccgccatgattttcgaaaggcgatgcctcaccacatccatatacat
ggaagaaatgcgggtagacctccgtgaatgggtaccgccaaacaaacctaccaccaaaggggtctcccttcccttaaaac
gatgggccagtttaagggaccacctggaactaatagacgagaaggctgccgccatgttcaatggagaaaatgtagacgag
cggatacacattggcggcaatgtccacgtcagtatcaacagcaagtatcctggagtggacatccgccatttctggtttcc
agaagactcaaacgaacccagacccagcagaaaaggactttccttaaagccaaacgagtga

Protein
Protein IDpfu_aug1.0_3272.1_01391.t1
Definition-
>pfu_aug1.0_3272.1_01391.t1
MNFDGLTHIQYTAMIFERRCLTTSIYMEEMRVDLREWVPPNKPTTKGVSLPLKRWASLRDHLELIDEKAAAMFNGENVDE
RIHIGGNVHVSINSKYPGVDIRHFWFPEDSNEPRPSRKGLSLKPNE

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