Gene
| Gene Model ID | pfu_aug1.0_3273.1_23272 |
|---|---|
| Locus | scaffold3273.1 : 28166 ... 44251 : + |
| To GenomeBrowser | scaffold3273.1:28166..44251 |
| Genes list of scaffold | scaffold3273.1 |
| Synonym | pfu_aug2.0_1142.1_08185 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3273.1_23272.t1 | 2 | 1 | PDZ | 27 | 104 | 9.6e-09 | 35.3 | 8.0e-12 | 4.0e-08 | 33.3 |
| pfu_aug1.0_3273.1_23272.t1 | 2 | 2 | PDZ | 276 | 295 | 9.6e-09 | 35.3 | 0.7 | 3500.0 | -1.8 |
| pfu_aug1.0_3273.1_23272.t1 | 2 | 1 | Death | 829 | 854 | 6.5e-13 | 48.2 | 0.46 | 2200.0 | -1.6 |
| pfu_aug1.0_3273.1_23272.t1 | 2 | 2 | Death | 1087 | 1162 | 6.5e-13 | 48.2 | 8.1e-16 | 4.0e-12 | 45.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3273.1_23272.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3273.1_23272.t1 atggggtcataccccatagctagatacaattaccacgagcaaaaccaacacccacccggtgtccccagggtcgtattggt cagaaaggtggcaggaaaactcggcttcaaattgcaagtaaaagagggcaacaatgagagtttcgccttaattaccaaag tgaaaccggagtgtagcttcattagtggttctcttcaccagctcgatcgaattttgaaaatctgtgatgtcgatgttacc caattgtccgaggaaaagatttttgatttgataaagattatcaataacgatgaagtaagactattagtgcagagaaatcc agaacatttagcacacgctcggcagttatcggaggggattccccagtcggcgtacaagaggcgacgagaccaggtgtcgt gtgggagcgggtcctccaacaaccaggaagctatgaagaaggtcaaggacgttatgccaaggttaattaagtccaatagt gtagacagcgataaaaaggaaccaagcgaaagtgatgctttactgaacactgacgctcgcctctttgaaacagttgactc tggtatgacgggggtggggatggtgaattctgaatttactcgcgccacctccctccaggagtatgacaccaggcctataa tagtggaggaagaggtgtacccctccatgcctctccatggctgtaaggactacctcaataataacagtactttgacaaac atggtgcctctcaaaattccaggttctcctcattttactgggagtttagaggatttgtttaaattcccccaccgtgtgat atgggacaccaccaccaaagctgtaaccctccacaccacctcgcaaggaaaatttggattctcgtataaagtgaagaaaa atgcgcttgatcttgaaaaaagattggagaatttagcagaggttaaaatagtgcttcagagacctgtgggcatgttgcca aaaccacaagcaaaattaatggtgcatcggcaggaacctgattctgttagtcagcaagctgttgtcatggttccctcccc aaccacttataaccacgatattctcggtaatgttcatttaccaggcagctactctccgaccaaagtcaagggaacggcag attacaaaagacaagcaagtgctgtgtcgcaaaactcaaactcgtcaaaacgaagctctggaagtggcgaagggaggtct cgatttgatgcaaaaaagcaaagcaatgcacctgtttcgaaggactcttcacttagaacagttgggatgtttgtggtgca acctatgccaaagcaaaattctttggatggtgactctgtgatggacattaggtccgacaaatgtagtcagaccagggtgg aggaggtagaaattattgttcccaatgaaagcaaaagtgcacattttgttgaagagttgcagatcaaccaaactataaaa ctaccgaaagtgcgtgttttcatatgcggtagtgaggccaggcaactggcgaaactaattttccctgaaaatactcttcc agaggaatcatgtggatatagactgtttgacctcgtgaaattaactatgatgatgaaccgtgataaagtcgtcagtttct cacagtggtcactttacgaaaatttgcttcatcgagtggaaaagtctcgttttcatgccagtaacgattcacttgataaa ctagacctcaaagaaagcagcatttctacgccgttgcataaaggggcaattaatacagaattttacatagtgcctgacga gaaatttttcaaccattgttgtcagtatttattcacgaggactagcatctttctgttagcctttgatggagttaaagtgt ttaattccttggacggggaaatttccagacttcagaatatgattcatacaatcaggtgtttcattggctatgaatgtccc attttaacttacggtttgttaggaggtgaccaatcagagctcagcaatgctgtcagtatggacgaagtaaggacattgtt ttatacatcgtatgggaatcaaatccacaaatacaacgtgcctggaccaagtctattcagcacatgtcccactgaacaag aatgtgttgaaatacggagaagtgtatggaaagcaataggggacaccgaggaaaaacaatacgtgctccgagcatctgta gcgatgatgcatcagttagagctccgacggcagcagggtactgtttgtattacagaggaagagttcacacagattttcca ggatttattacctagtgctgatgttggctctagacaagtggtgtggtctgagcttaaagattttggtgaaatcctgtcat caaatggtgctcctctttatgtgcctcaatccaagaatctacaaaatcagctatttatagaccctcagatcttactgacc atcgtccatcactggcatacgatatcgccaaggtccggccaagtcacggacaagcacatgttcatgaagctggtgggcag cggcaatatctcgcatacagatctggtcagcatcacccagtgtcacaatgtcagtgtcgacagacttatctcccttctac aaggatttggactgacattccagtataaaacgaacaacaccgagcagagacaatattttgtgccttgcttcctctccgac ctgatgtcgtcagaaattccgcgatcggaatcttttgaagggtgcctttatctccagtttctaaaaccgttacatctgtc cagtatgatatttttccaagtttgtttcggattagacatgcacagtgagacaagagacttggatttccctggagctaact gttgtaaattcacttgtatgggctcagacgtggtgcttgttcatcagaagctgtatgacagaatccagatactagtaaac aaacgcagtggacgaatggataagttgtaccagttgttacatgcactgttaccagagatccttggagctgagatacgcta caccctgggtcctgcctgtcctttacagtccttagacaagtgtagggtgagccactcccagcgtaacgcaggggacgtac acgtgatagacttggctgagggagcaccgtacatgtgtgggcaggaaaaattcgacaataacaagaatatcaggatgtgg gtgtcaaagcatatcagccaacctgtggttcagcaagtgccaaagaacaaagagactgagtccaataaaagtttgatatc ggaagaggcacctcggctccaaatgtacatcatagatttaccttacactctgtttgagcaagtgttcagatatctacaaa taaacggaggaagggactggaaacaattagccgggaatcttggattcacgacagaacatatcctgttatttgagcagaag cccgatcctgccaaggagctccttattacgctcaaccagcaacgtagactgacgatcggtaaactgattgaggaactctc tgaaatggaacgttttgacattgtagagaaactgaatgaatggcttgctactacatag |
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Protein
| Protein ID | pfu_aug1.0_3273.1_23272.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3273.1_23272.t1 MGSYPIARYNYHEQNQHPPGVPRVVLVRKVAGKLGFKLQVKEGNNESFALITKVKPECSFISGSLHQLDRILKICDVDVT QLSEEKIFDLIKIINNDEVRLLVQRNPEHLAHARQLSEGIPQSAYKRRRDQVSCGSGSSNNQEAMKKVKDVMPRLIKSNS VDSDKKEPSESDALLNTDARLFETVDSGMTGVGMVNSEFTRATSLQEYDTRPIIVEEEVYPSMPLHGCKDYLNNNSTLTN MVPLKIPGSPHFTGSLEDLFKFPHRVIWDTTTKAVTLHTTSQGKFGFSYKVKKNALDLEKRLENLAEVKIVLQRPVGMLP KPQAKLMVHRQEPDSVSQQAVVMVPSPTTYNHDILGNVHLPGSYSPTKVKGTADYKRQASAVSQNSNSSKRSSGSGEGRS RFDAKKQSNAPVSKDSSLRTVGMFVVQPMPKQNSLDGDSVMDIRSDKCSQTRVEEVEIIVPNESKSAHFVEELQINQTIK LPKVRVFICGSEARQLAKLIFPENTLPEESCGYRLFDLVKLTMMMNRDKVVSFSQWSLYENLLHRVEKSRFHASNDSLDK LDLKESSISTPLHKGAINTEFYIVPDEKFFNHCCQYLFTRTSIFLLAFDGVKVFNSLDGEISRLQNMIHTIRCFIGYECP ILTYGLLGGDQSELSNAVSMDEVRTLFYTSYGNQIHKYNVPGPSLFSTCPTEQECVEIRRSVWKAIGDTEEKQYVLRASV AMMHQLELRRQQGTVCITEEEFTQIFQDLLPSADVGSRQVVWSELKDFGEILSSNGAPLYVPQSKNLQNQLFIDPQILLT IVHHWHTISPRSGQVTDKHMFMKLVGSGNISHTDLVSITQCHNVSVDRLISLLQGFGLTFQYKTNNTEQRQYFVPCFLSD LMSSEIPRSESFEGCLYLQFLKPLHLSSMIFFQVCFGLDMHSETRDLDFPGANCCKFTCMGSDVVLVHQKLYDRIQILVN KRSGRMDKLYQLLHALLPEILGAEIRYTLGPACPLQSLDKCRVSHSQRNAGDVHVIDLAEGAPYMCGQEKFDNNKNIRMW VSKHISQPVVQQVPKNKETESNKSLISEEAPRLQMYIIDLPYTLFEQVFRYLQINGGRDWKQLAGNLGFTTEHILLFEQK PDPAKELLITLNQQRRLTIGKLIEELSEMERFDIVEKLNEWLATT |
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