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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_32761.1_33855
Locus scaffold32761.1 : 18 ... 5995 : -
To GenomeBrowser scaffold32761.1:18..5995
Genes list of scaffold scaffold32761.1
Synonym pfu_aug2.0_1334.1_14971

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_32761.1_33855.t1 1 1 NO_synthase 1 130 0.0 220.0 0.0 0.0 219.6
pfu_aug1.0_32761.1_33855.t1 1 1 Flavodoxin_1 167 215 7.2e-12 45.5 2.4e-15 1.8e-11 44.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_32761.1_33855.t1 gi|21310085|gb|AAM46138.1|AF380137_1 neuronal nitric oxide synthase [Takifugu poecilonotus] 0.0

Transcript
Transcript IDpfu_aug1.0_32761.1_33855.t1
Definition-
>pfu_aug1.0_32761.1_33855.t1
atgtttgacgtcttacccctggttcttcaagctgatggaaagaaaccagaactgtttgatattccatcagacattatcct
ggaggtgaacataaaacatccgaagtttcctaaactctctgaaatgaatctgaaatggtttgcccttcctgccgtatcaa
atatgatgtttgactgtggaggtctagaattctgtgctgcccctttcagtggatggtacatggagacagaaataggcgtc
agagatttctgtgattctcagcgatataatctggttgaaaaaatagcagagaaaatggacttcgatacaaataacacatc
ttcgctatggaaggacaaagctgccgtggagatgaacgttgctgttttacatagctttcaatacaacgattcttcaaaaa
ggttctttggattcggcctccgagtaaaacaagaacctctaacatttaatcgagaatgtaatccaatgacagaactttca
gaatgttattacttattttcaaaggttgtgtgcatggctgattacgacattaggaacataagattccaagatttggttct
ggttgtaacaagtacttttggaaatggtgatccaccggagaacggaaagacctttaagaacaaagtggaagatttacaat
taaagaccgcaaaaaggttaaatttctaa

Protein
Protein IDpfu_aug1.0_32761.1_33855.t1
Definition-
>pfu_aug1.0_32761.1_33855.t1
MFDVLPLVLQADGKKPELFDIPSDIILEVNIKHPKFPKLSEMNLKWFALPAVSNMMFDCGGLEFCAAPFSGWYMETEIGV
RDFCDSQRYNLVEKIAEKMDFDTNNTSSLWKDKAAVEMNVAVLHSFQYNDSSKRFFGFGLRVKQEPLTFNRECNPMTELS
ECYYLFSKVVCMADYDIRNIRFQDLVLVVTSTFGNGDPPENGKTFKNKVEDLQLKTAKRLNF

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