Gene
| Gene Model ID | pfu_aug1.0_32779.1_19465 |
|---|---|
| Locus | scaffold32779.1 : 1 ... 6882 : - |
| To GenomeBrowser | scaffold32779.1:1..6882 |
| Genes list of scaffold | scaffold32779.1 |
| Synonym | pfu_aug2.0_138.1_26925 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_32779.1_19465.t1 | 1 | 1 | RTC_insert | 26 | 85 | 3.6e-07 | 30.1 | 6.0e-11 | 4.5e-07 | 29.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_32779.1_19465.t1 | gi|296208633|ref|XP_002751183.1| | PREDICTED: RNA 3'-terminal phosphate cyclase isoform X1 [Callithrix jacchus] | 2.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_32779.1_19465.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_32779.1_19465.t1 aggattttatccaaagggaggaggtgaagttcaagtaaaggtattccctagtaaatgtctgaatgctgtagatgctacag atcgaggtcaacttaccagagttactggtcaagcttttgtagcgggagttttaccaataaaagttgccagggcaatgtca catagtgctcaagatgttgtaaggaatctctatccagatgcatccatgcatatcgatgttaaacaagaaacctcagcatc tgcatttggaacgggcgaatctaacgcatacattcggagttatagccgtttgaaaacgtcattttga |
|
Protein
| Protein ID | pfu_aug1.0_32779.1_19465.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_32779.1_19465.t1 GFYPKGGGEVQVKVFPSKCLNAVDATDRGQLTRVTGQAFVAGVLPIKVARAMSHSAQDVVRNLYPDASMHIDVKQETSAS AFGTGESNAYIRSYSRLKTSF |
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