Gene
| Gene Model ID | pfu_aug1.0_328.1_36495 |
|---|---|
| Locus | scaffold328.1 : 11996 ... 51342 : + |
| To GenomeBrowser | scaffold328.1:11996..51342 |
| Genes list of scaffold | scaffold328.1 |
| Synonym | pfu_aug2.0_655.1_17693 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_328.1_36495.t1 | 1 | 1 | Mg_trans_NIPA | 51 | 332 | 0.0 | 241.8 | 0.0 | 0.0 | 241.2 |
| pfu_aug1.0_328.1_36495.t1 | 2 | 1 | EmrE | 86 | 165 | 2.3e-06 | 27.7 | 6.1e-10 | 2.3e-06 | 27.7 |
| pfu_aug1.0_328.1_36495.t1 | 1 | 1 | EamA | 98 | 164 | 3.0e-06 | 27.2 | 8.1e-10 | 3.0e-06 | 27.2 |
| pfu_aug1.0_328.1_36495.t1 | 2 | 2 | EmrE | 253 | 336 | 2.3e-06 | 27.7 | 0.088 | 330.0 | 1.5 |
| pfu_aug1.0_328.1_36495.t1 | 2 | 1 | Peptidase_M14 | 538 | 660 | 1.4e-18 | 67.4 | 1.4e-21 | 5.2e-18 | 65.6 |
| pfu_aug1.0_328.1_36495.t1 | 2 | 2 | Peptidase_M14 | 917 | 931 | 1.4e-18 | 67.4 | 0.92 | 3400.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_328.1_36495.t1 | gi|260797209|ref|XP_002593596.1| | hypothetical protein BRAFLDRAFT_128743 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_328.1_36495.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_328.1_36495.t1 atgaaaagcttgcgtccttcatcaaccaaacttgtgtgggtgatgtatctgatatttactgcaatgaatgatacagatct aacccatattttactcttgactgaccagctgatcaggtttggtaaaatcagacacctcaatttcctgcttactgatattc tggtaggatgtctactcgccattggaggaaaccttctcatcagtgtctctctaaacatacagaagtacacgcacatgaag aactcggagagagctgttcagatccactacgtcaaagagccactttggtggctgggtctgaccctgatggcctttggtga gctaggtaacttctctgcttatggctttgccccggcatccttagtggcacccctaggcactaccactgttatagctaata tgtttctcgcagcattgtttttgaaagagaagattcgagcagagcacctatttggttctgctttggctatcattggtgct ttcctgttggtagcctttgctgctaagatgcaatatcagacatttgttgagtgttattatcttcgatcatattcagtttt tctatctttacagtgtgtagagctgctaatattaggcttgctatttttcatgctgtattataaagatatgaagaaagttg tcatctacttacttatcacatctatcatagcatcgttcacagttatatctgccaaggctgtctctagtatggttcagttg agttttgccggctattcacagttctcttacccgatactctatgttatgttaatcgtcatggggatcacaatagttataca agtcagatatttgaatgaggccatgaagagttttgattccacagtagtggtacctaccaactttgtcttctttacaatca gtgcaataatagcaggagttatcttttataaagagttctggggaatgaatggactagagatcttcatgtttttcattggg tgtatcctgtcatttattggtgtatactttatcaccctgggtaaactatcagccacgtcagctgacgatcatgtgacaga accatcctcctccacagagtacgcacaacagatctcaccttctttatttccatcatggctgatggcatcggtcaatgtag gagaggtacaaccaaagtctgaggtcacccacttatcagattcggatcattatattttgaatgaacagtatttttacctc cacaatcatgtttttaatgaatttatcgatgaaaggtcatggttttactttggtattcgtggttggaatccaaaccggct gattcgtatcaatatcatgaacctgaatcgtcagggtaaactgtacagccagggccacgcccccatcacaaagaccatcc caggccagcctaagtgggctaggatcagagatagaccttcatacgagacagtggatggtcagttcattctgacttttaac caccgattcctggatgttaaaggtgctataacatactttgctttctgctttccctggtcatacatggagcaacaagaacg actgaacgaactggataaaaagtttgcatattgcaaatctatcaacacaaacacacaaaaggacaccatatactaccatc gtgaagtgctgcattactccatggacaagctacgcatagaattattaactctgtcatcatgtcacggcatcagctcagaa actgagcccagatttgatcttaacttgttcccagaaaaagatcaacctagatgtcgcaaattcagaaacaaaagagttta ttttctgagtagcagagttcatcctggagagacaccgtcaagttttgtatttaatggattcttagattttctgcttagag aaaatgacccacgtgccaaagctttgaggaaaaactttgtattcaaattaattcctctgttgaatcccgatggcgtaagt agaggccattacaggacagatcaaaggggagtaaatctgaacagactgtacctagaccctaatgttgaccttcatcctac catttatgcatcaaaaagtgtgctagtgtatcatcatgtcaaaaaccgtgtgataaggcctgatgataatgtcaatatcc gtattaacttccctggatatatactaacgtctactcccgaagcccccacccccgtcaaagaaaaatctgtacaacacgat gctggtgattataacgctaataataacaaatctcatcgtaccaatggtgctacaaacttagtcaacggtaaaagtgttca aaacagaaacgtagagaggaagtctacgatgaatcgtgagttttcctgggttagtagttgtagtcatgatggtggattac cgccaccgtcaggtagaatcaaagtagaaccgctgaacctaggtaacttagaaagagacgacacaactcttagtgaatct cagagactcatgggtaaccccggaggtgacctcatgatgtcatcaacatgtagtagtgtgttaagtactgttactgtaaa agaaaatagaaggaccgtagatagtgaattgcgtcttcgattatcggaactaaacatgtctgatgatggtaggggtaaga tgacaggacttagtatgctgacctctgttagtatgggactgaacgattcagacattgaggatgggaacacagaacatcta ggtaacgagggatcagaggatgaaggtgattttacaccctctatgtcgtctggaactaactctccccatctgtctgatcc ccagcttctgtctatacccccacacgagagtggcattgcattctacgtggatctacatggccatgcttctaaacgaggat gctttatttatggaaattattttgaaaatgaagatactcaggttggtagggcactttgtgtagctgccctggattacttt gatatgaatccctggtcacgtatttcgtcgtcagagctgaacagccttatgggagtgcgtgataatgtcaggagatatat acgtagtatgaggggcggccccaggcttccgaggaaccctcagaaatcattcatcagaaacaatgcaacaacagggactc agtataataatcgattaaactccaatcaaaacagtcgacctccagtatcacgtgtcaactcattcggacatgactcatct gcaagtaatggaggatcagcttccaggctccgcagagagaacctaaacacccaacctcaaaggaaggaattaggtccggt cagagaagttggcagacagaatctgaataacaccatacagcagaggaagcgttctgtgccgagttatccttcatcccaga ctgctcgtacccacagtggccctataacccttaccatgaccacggtagaggccaaaaataaacggcaactttccgcagat attgccgaccgtcaagcagaggaggacaaaatcaatcaactcaaacaccttgccatagccagaaagcctggtccacctag tcgtatccccctgcctacaggtcagcaattcatgcaactagcctccccttccccacgggagctttccccgcccagagtgc caaacaagagtgcccgctacaacgcccgtactccccaccaaccacagcattatcccataaagaaggcaactgctgagacc ttgacctctgacgtaccaatgagagcatacacgcccggacaattagcgttactcaactccagcttcctggggcaggggga tgtgaaggaacctgtcactccagggcctcacagcatacatgccccacccatcacaccaggaccatacccaatccccactc cccctgatgccaacagtgcagatcttggaagtgattccccaaagagacgaagacgctacatgtacatgaagagaagaaac gtaaaccagagtcccaaaatcggtagtgcttctaataaagacacatcaccagtactcgcagccaaccaaatactctcctc ccccttagacagctatcgactcccatcagaaaacagctccactccgcgccagtaa |
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Protein
| Protein ID | pfu_aug1.0_328.1_36495.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_328.1_36495.t1 MKSLRPSSTKLVWVMYLIFTAMNDTDLTHILLLTDQLIRFGKIRHLNFLLTDILVGCLLAIGGNLLISVSLNIQKYTHMK NSERAVQIHYVKEPLWWLGLTLMAFGELGNFSAYGFAPASLVAPLGTTTVIANMFLAALFLKEKIRAEHLFGSALAIIGA FLLVAFAAKMQYQTFVECYYLRSYSVFLSLQCVELLILGLLFFMLYYKDMKKVVIYLLITSIIASFTVISAKAVSSMVQL SFAGYSQFSYPILYVMLIVMGITIVIQVRYLNEAMKSFDSTVVVPTNFVFFTISAIIAGVIFYKEFWGMNGLEIFMFFIG CILSFIGVYFITLGKLSATSADDHVTEPSSSTEYAQQISPSLFPSWLMASVNVGEVQPKSEVTHLSDSDHYILNEQYFYL HNHVFNEFIDERSWFYFGIRGWNPNRLIRINIMNLNRQGKLYSQGHAPITKTIPGQPKWARIRDRPSYETVDGQFILTFN HRFLDVKGAITYFAFCFPWSYMEQQERLNELDKKFAYCKSINTNTQKDTIYYHREVLHYSMDKLRIELLTLSSCHGISSE TEPRFDLNLFPEKDQPRCRKFRNKRVYFLSSRVHPGETPSSFVFNGFLDFLLRENDPRAKALRKNFVFKLIPLLNPDGVS RGHYRTDQRGVNLNRLYLDPNVDLHPTIYASKSVLVYHHVKNRVIRPDDNVNIRINFPGYILTSTPEAPTPVKEKSVQHD AGDYNANNNKSHRTNGATNLVNGKSVQNRNVERKSTMNREFSWVSSCSHDGGLPPPSGRIKVEPLNLGNLERDDTTLSES QRLMGNPGGDLMMSSTCSSVLSTVTVKENRRTVDSELRLRLSELNMSDDGRGKMTGLSMLTSVSMGLNDSDIEDGNTEHL GNEGSEDEGDFTPSMSSGTNSPHLSDPQLLSIPPHESGIAFYVDLHGHASKRGCFIYGNYFENEDTQVGRALCVAALDYF DMNPWSRISSSELNSLMGVRDNVRRYIRSMRGGPRLPRNPQKSFIRNNATTGTQYNNRLNSNQNSRPPVSRVNSFGHDSS ASNGGSASRLRRENLNTQPQRKELGPVREVGRQNLNNTIQQRKRSVPSYPSSQTARTHSGPITLTMTTVEAKNKRQLSAD IADRQAEEDKINQLKHLAIARKPGPPSRIPLPTGQQFMQLASPSPRELSPPRVPNKSARYNARTPHQPQHYPIKKATAET LTSDVPMRAYTPGQLALLNSSFLGQGDVKEPVTPGPHSIHAPPITPGPYPIPTPPDANSADLGSDSPKRRRRYMYMKRRN VNQSPKIGSASNKDTSPVLAANQILSSPLDSYRLPSENSSTPRQ |
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