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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3287.1_23273
Locus scaffold3287.1 : 1046 ... 11385 : +
To GenomeBrowser scaffold3287.1:1046..11385
Genes list of scaffold scaffold3287.1
Synonym pfu_aug2.0_1430.1_01626

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3287.1_23273.t1 1 1 p450 1 289 2.1e-40 138.6 1.82169e-44 2.6e-40 138.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_3287.1_23273.t1
Definition-
>pfu_aug1.0_3287.1_23273.t1
atgcacagggaagtcgcagctttatctaaacagtatggacctgtaatacagttgaaaatgggtcctacaccagtagtcgt
attgaataacctggaggtagtcatcgaggcattggtcaagaaaagtgccgacttttccagcagacctcgatttttcacag
gtgaacttttctcacaaaacggaaaaggtatcgnacaatgtaataggaactttgaaaagaaaagtcaaacgccgcaaggc
acatctgtcatttcaatagtaacaggatactacatgcatggagaaaaacttgaaaatatgataaacgacgtgtgtgaaag
aattttcgaaagaatgtcaaaggaacaagacccattcagtgttaccgattacatcgacaaactggtcattcatatgttat
tcaatatgtgttttgcaaggaagtgtgatctaaatgatcctgatgttgagagactattgaaaatcgacacagaagttgtt
gagacttttggaaatggacttctagaggaccttgtaccagccatgacatacgtgtacaagacacaacgatgtaagagggt
tgagagcttgctttttgaagcacttagctttttgaagaaggaactaaatcaacacgaagaaacttttgacccgaataaca
taagggactacacagacagtctgctgtttgccagggaggaagccgaagacaaaccggaagaagcatcaaagctgacagag
gtgtacatcgtgcaaatcctaaatgatatattcttcgctggattagatacgacaaaaatgacactagattggttcatctg
cttcatgattgccaacccagatttccaagagatatgcttcgaggaaattcaaaaggcaattgaattcgaaaatttgaata
ataataatgtggaagggttccaactctctaccttcttgaagacaattccaaaccaatttacatgcaccagacacgtgttt
cgaatattaaattctcatcagtga

Protein
Protein IDpfu_aug1.0_3287.1_23273.t1
Definition-
>pfu_aug1.0_3287.1_23273.t1
MHREVAALSKQYGPVIQLKMGPTPVVVLNNLEVVIEALVKKSADFSSRPRFFTGELFSQNGKGIXQCNRNFEKKSQTPQG
TSVISIVTGYYMHGEKLENMINDVCERIFERMSKEQDPFSVTDYIDKLVIHMLFNMCFARKCDLNDPDVERLLKIDTEVV
ETFGNGLLEDLVPAMTYVYKTQRCKRVESLLFEALSFLKKELNQHEETFDPNNIRDYTDSLLFAREEAEDKPEEASKLTE
VYIVQILNDIFFAGLDTTKMTLDWFICFMIANPDFQEICFEEIQKAIEFENLNNNNVEGFQLSTFLKTIPNQFTCTRHVF
RILNSHQ

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