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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3287.1_23283
Locus scaffold3287.1 : 86286 ... 104944 : +
To GenomeBrowser scaffold3287.1:86286..104944
Genes list of scaffold scaffold3287.1
Synonym pfu_aug2.0_2442.1_08866

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3287.1_23283.t1 3 1 MFS_1 23 56 2.4e-08 33.0 0.00013 0.98 8.0
pfu_aug1.0_3287.1_23283.t1 3 2 MFS_1 92 159 2.4e-08 33.0 0.00019 1.4 7.5
pfu_aug1.0_3287.1_23283.t1 3 3 MFS_1 165 224 2.4e-08 33.0 5.0e-10 3.7e-06 25.8

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_3287.1_23283.t1
Definition-
>pfu_aug1.0_3287.1_23283.t1
atgttccagctgctacttctgctggcggcatcctttcaacccaacacggacgtcagtccaccagtccgtccctttgctgg
tatatttgaagagaaatttggatgtaggacagtggctgtgtcgggttccatacttattggtattgggcttgcactaagct
cttttgtcaatgaaatggatctactgtactttagttacggaattgtgacaggcaaggatacagatatcaaatacatatca
agctgcaagatgaatgatttagaccctaaagttcctgaagtggactccctttggacgaagtccaaatacatcttatcatc
aaagacattcattatattcaatatttcatccatattcgtcaacttgggatacttcattccttttattatgttaccggata
tggttataggacgaggaatatcgaaaacaaatgcctcatttctgataactacatccggaatttcaagcgtattcggaatg
taccagtcattgattatggtagatattgttggtaaggaacatatgggtttggcatacggttatcaaacgttcttaagtgg
aatcgctattgttctgggtccacccctcgcaggattactttacgacagaactggtgactatatcatttcgttcgtttgct
gcggaacttttttccttataggtggaatactcagtgtcatatcaaccatcgtccatttacgtgggaaacagtatactttg
tag

Protein
Protein IDpfu_aug1.0_3287.1_23283.t1
Definition-
>pfu_aug1.0_3287.1_23283.t1
MFQLLLLLAASFQPNTDVSPPVRPFAGIFEEKFGCRTVAVSGSILIGIGLALSSFVNEMDLLYFSYGIVTGKDTDIKYIS
SCKMNDLDPKVPEVDSLWTKSKYILSSKTFIIFNISSIFVNLGYFIPFIMLPDMVIGRGISKTNASFLITTSGISSVFGM
YQSLIMVDIVGKEHMGLAYGYQTFLSGIAIVLGPPLAGLLYDRTGDYIISFVCCGTFFLIGGILSVISTIVHLRGKQYTL

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