Gene
| Gene Model ID | pfu_aug1.0_3293.1_23284 |
|---|---|
| Locus | scaffold3293.1 : 1 ... 10330 : + |
| To GenomeBrowser | scaffold3293.1:1..10330 |
| Genes list of scaffold | scaffold3293.1 |
| Synonym | pfu_aug2.0_267.1_23783 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3293.1_23284.t1 | 1 | 1 | UCH | 34 | 361 | 4.2e-39 | 134.2 | 1.10002e-42 | 5.3e-39 | 133.9 |
| pfu_aug1.0_3293.1_23284.t1 | 1 | 1 | UCH_1 | 35 | 317 | 1.8e-07 | 30.8 | 8.5e-11 | 4.2e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3293.1_23284.t1 | gi|345489070|ref|XP_001603642.2| | PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Nasonia vitripennis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3293.1_23284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3293.1_23284.t1 tatgtcctgaatcccactttcaccacagaggccatttcagtgttagataccaacagtaaattatccagagcatatgacgg aactacatatttaccaggagttgtgggtttgaacaacatcaaagaaaatgattactgcaacgtcattttacaagcttttg cccacgtgtcacccctccggaactactttctccaagaggaaagctacaagaagatcaagcggccccctggagatataatg ataacacttgtgcaaagattcggagaatttctacgaaagttatggaaccctagaaatttcaaagctcatgtcagtcctca tgaaatgttacaggccgttgtcttgtgcagcaagaagaaatttcaaatcaccgaacaaggagatgctttagaattcatgt cttggatcctgaatgcccttcaccttgccttgaatggttccaggaagttaagtagcagcataatcaataaaactttcaga ggcaaaatgagagtgtatacaagaaaagtcctaccaatcgatctgaaagacgaagaaaaggccaaattactagaaacagg agaatatatggaaacaatggatgagattccgtggctgtatttgacctgtgacctcccaccctcgcctctgtacccggatg aactcagggagaacatcataccacaggttccctttgccactctactgtccaagtttaacggagtctcggagaaggaatac aagactcaccgtgactcgcatctcaaacgatttgtcatcacccatctcccacagtacatcatcatctttatcaagagatt tacaaagaattatttcatcaaagagaagaacaacactatagtgaattttcctattaaaaacattgactttggagacctct taccaccggaagaaagagtgaagcataagtgtaccacatacgatctaatggcaaatgtagtacatgatggactaccagag agaggcaagggtacttacaggtgtcacgttctacataagggtactcagaaatggtttgagctgcaggatttacacgtgac ggagatccttcctcagatgatacccctgtcagagagctacatacagatatttgagttaaggaaggacatacccaatccaa tgtatggtaaggatcccaaagacgtggtcagtcaggatatgtacatggatactcaggacagatga |
|
Protein
| Protein ID | pfu_aug1.0_3293.1_23284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3293.1_23284.t1 YVLNPTFTTEAISVLDTNSKLSRAYDGTTYLPGVVGLNNIKENDYCNVILQAFAHVSPLRNYFLQEESYKKIKRPPGDIM ITLVQRFGEFLRKLWNPRNFKAHVSPHEMLQAVVLCSKKKFQITEQGDALEFMSWILNALHLALNGSRKLSSSIINKTFR GKMRVYTRKVLPIDLKDEEKAKLLETGEYMETMDEIPWLYLTCDLPPSPLYPDELRENIIPQVPFATLLSKFNGVSEKEY KTHRDSHLKRFVITHLPQYIIIFIKRFTKNYFIKEKNNTIVNFPIKNIDFGDLLPPEERVKHKCTTYDLMANVVHDGLPE RGKGTYRCHVLHKGTQKWFELQDLHVTEILPQMIPLSESYIQIFELRKDIPNPMYGKDPKDVVSQDMYMDTQDR |
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