Gene
| Gene Model ID | pfu_aug1.0_3293.1_23286 |
|---|---|
| Locus | scaffold3293.1 : 24007 ... 49665 : - |
| To GenomeBrowser | scaffold3293.1:24007..49665 |
| Genes list of scaffold | scaffold3293.1 |
| Synonym | pfu_aug2.0_320.1_00594 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3293.1_23286.t1 | 1 | 1 | UBX | 258 | 324 | 2.5e-10 | 40.2 | 6.0e-14 | 4.5e-10 | 39.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3293.1_23286.t1 | gi|291224713|ref|XP_002732347.1| | PREDICTED: UBX domain-containing protein 8-like [Saccoglossus kowalevskii] | 6.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3293.1_23286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3293.1_23286.t1 atggagcccggtttaggtgcaactttgcttgttcttgcagctgttggggctgttatttactttcaagcagattctttcac agtttttcaatggattacaaagttcattctcctttttggatttcttactttttgtgtacaatgttttggaacaagatgga ttaatctgctcaagaggatgctttataaaaagaaagatacagaagatgacagcaacagatatgaagaggaagaattgaaa ggaaaagaaaaactctccagggacaaaatacaagacgaatacagagaaaaggctgcaagctacaaagaaagaattctagg cccccgcgaggagaataagaaaagaaagaaagaggaggagtattaccgattccttggacctgcatggaagggcgagggtc acgccctagggactggaccccctttttatctgcgcataagaatgatgcatgtcgaccgaaacttagccccagaaatgacc aacgacacttggctatttggttggttggatggttaccccaaccaaccaaaaagccaagtgtcgttggtcgtttctgcggt taaccgtttaccatctcaacagggaaatgttgatcaatatgatgaagatggaactgcaagaaaccctgctaatatacgac agatcccggaccaaataaatgaagatgtcgccaggagaagtagagaagagatggagatacgtaaacgtaaagaatccaga aaggttatagaacttcccgaggaaccaccagagggagctgctggttgtgtagtagttgtattgagactgccgattggtca ggcacgacagcggaggttctgtcaatcaaatacaatagagaatgtcctagattatatgacgacgattggattcaataaga gacgatacacggtgtacacgtccttcccaaggcggtgtctcacagatcaaagggcagtgacattacacgatctcggattt tctcggaaagtgacattaaatgtggaagaaatagaggaatga |
|
Protein
| Protein ID | pfu_aug1.0_3293.1_23286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3293.1_23286.t1 MEPGLGATLLVLAAVGAVIYFQADSFTVFQWITKFILLFGFLTFCVQCFGTRWINLLKRMLYKKKDTEDDSNRYEEEELK GKEKLSRDKIQDEYREKAASYKERILGPREENKKRKKEEEYYRFLGPAWKGEGHALGTGPPFYLRIRMMHVDRNLAPEMT NDTWLFGWLDGYPNQPKSQVSLVVSAVNRLPSQQGNVDQYDEDGTARNPANIRQIPDQINEDVARRSREEMEIRKRKESR KVIELPEEPPEGAAGCVVVVLRLPIGQARQRRFCQSNTIENVLDYMTTIGFNKRRYTVYTSFPRRCLTDQRAVTLHDLGF SRKVTLNVEEIEE |
|