Gene
| Gene Model ID | pfu_aug1.0_33.1_43420 |
|---|---|
| Locus | scaffold33.1 : 20056 ... 24667 : + |
| To GenomeBrowser | scaffold33.1:20056..24667 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug2.0_5309.1_32778 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_33.1_43420.t1 | 1 | 1 | EBP | 1 | 118 | 2.89999e-41 | 140.6 | 2.8026e-45 | 3.30006e-41 | 140.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_33.1_43420.t1 | gi|148224966|ref|NP_001080469.1| | emopamil binding protein (sterol isomerase) [Xenopus laevis] | 5.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_33.1_43420.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43420.t1 atgtggaaggagtacgggaaaggggacagccgttatatcacgtcagacacattcacggtgtgtatggagactataacggc ggtgattgacggtccactcagtctgctgaccgcccacgccattctaaaccacgcccctcatcgatatttcctccagctca ccgtgtctctctgtcagctgtacggcgattctctatactacatgacagagattagggagggattcaaacacggagaactc tggcatccgttacacttttggttttattttgtttttcttaacgcattttggatcattattccattaactttgattggaca agcaggaaaacgaatcagccaatcacagtcattgtatgacaaagacagaagaaccaactcgaagaaaaagtcaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_33.1_43420.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43420.t1 MWKEYGKGDSRYITSDTFTVCMETITAVIDGPLSLLTAHAILNHAPHRYFLQLTVSLCQLYGDSLYYMTEIREGFKHGEL WHPLHFWFYFVFLNAFWIIIPLTLIGQAGKRISQSQSLYDKDRRTNSKKKSK |
|