Gene
| Gene Model ID | pfu_aug1.0_33.1_43421 |
|---|---|
| Locus | scaffold33.1 : 25599 ... 40215 : - |
| To GenomeBrowser | scaffold33.1:25599..40215 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug2.0_5309.1_32779 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | PFMG11A |
| Description | reciprocal BLASTN best hit to DQ116438.1 Pinctada fucata mantle protein 11 (MG11) mRNA |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_33.1_43421.t1 | gi|71063304|gb|AAZ22320.1| | mantle protein 11 [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_33.1_43421.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43421.t1 atgttgtcaatcaacaactcaagcatccggatgatatcttcttcggtatactttttgtttgaatcagagtgttccttcac gaatagatataaggtagttcaagatcagagtcatcagtatgaataccgaaggacgcaagaacagatttgtggttgtcaag tatttcagatacagataagcttgagtatcaggagttatcgttcttaccgttcatacagttattcttaccgatattaccgt tattcttccggttacacctaccgttactacaggtcgtactactacgattattcctacaccagtagtagatcggggagtac cacaggaatcattgttggcagtaccatagccgggttaataatagctggttcttttctgttcatctgctggttctgttgga aaagacgcaggtcccagtccaggagcggtagagtcatacaaacaaataatgtaaccagcatatcaccttcaagagctgta tgtgctgtcaatcccaacgtggtcacctatactacacaggaaggtaacaatgcctacatccctgctgttaatccaccaaa atacgaaactgttgtccaaaacggatcagccgactctactggtcagagctatggacagcctcctccctaccctgttacca ctgactcagagacacatggacagcagaatgatcacgtgactcatgatacagctaaacttgtaaaagactag |
|
Protein
| Protein ID | pfu_aug1.0_33.1_43421.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43421.t1 MLSINNSSIRMISSSVYFLFESECSFTNRYKVVQDQSHQYEYRRTQEQICGCQVFQIQISLSIRSYRSYRSYSYSYRYYR YSSGYTYRYYRSYYYDYSYTSSRSGSTTGIIVGSTIAGLIIAGSFLFICWFCWKRRRSQSRSGRVIQTNNVTSISPSRAV CAVNPNVVTYTTQEGNNAYIPAVNPPKYETVVQNGSADSTGQSYGQPPPYPVTTDSETHGQQNDHVTHDTAKLVKD |
|