Gene
Gene Model ID | pfu_aug1.0_33.1_43422 |
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Locus | scaffold33.1 : 40363 ... 49995 : - |
To GenomeBrowser | scaffold33.1:40363..49995 |
Genes list of scaffold | scaffold33.1 |
Synonym | pfu_aug2.0_1957.1_25222 |
Manual annotation
Study field | Biomineralization |
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Gene name | PFMG11B |
Description | reciprocal BLASTN best hit to DQ116438.1 Pinctada fucata mantle protein 11 (MG11) mRNA |
mRNA evidence |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantlePallium | 2 |
Transcript
Transcript ID | pfu_aug1.0_33.1_43422.t1 |
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Definition | - |
>pfu_aug1.0_33.1_43422.t1 atggaccgcagctatgtgaaaaaggctaatatcagaagtccagttcatgtacggaatgtatttggtatcaaccagacgtg gattttaaagaattcgaaggaacttttagaagatctgaaatccactcattttagtagagtccaatcgatcaaagcctttg atttttcgacactttacactacaattccacattctaaattgaaagaaagactcgcaaaaattataagtaatgcgtttaca atgttgtatgtccactctgtcaggagttaccgttattaccgttcatacagttattattcataccgatattaccgttattc ctacagctacacctaccgttactacaggacatcgtattactactattactcgtataccggcagtagttactcgggcagta caacaggcatcgttgttggtagtatcatagccggggttcttatcgcgggaactgtgctgtttatctgctggttctgtaag aaaagacgcaggtcccagtcaaccagcggtagagttatacaaaccagtaatgtgaccagcatatcaccaccaagagttgt aggtactgtcaatcccaacgtggtcacctatactacacaggaaggtaacattgcctatgcccctgccctcaatccaccaa aatacgaaactgtggtcacaaacggatcagccgactctactggtcagagctacggacagcctcctccctaccctgttact acaggtacagagacacatggacagcaggatgatcacgtgactcatgatacggctaaacttgtaaaagattag |
Protein
Protein ID | pfu_aug1.0_33.1_43422.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33.1_43422.t1 MDRSYVKKANIRSPVHVRNVFGINQTWILKNSKELLEDLKSTHFSRVQSIKAFDFSTLYTTIPHSKLKERLAKIISNAFT MLYVHSVRSYRYYRSYSYYSYRYYRYSYSYTYRYYRTSYYYYYSYTGSSYSGSTTGIVVGSIIAGVLIAGTVLFICWFCK KRRRSQSTSGRVIQTSNVTSISPPRVVGTVNPNVVTYTTQEGNIAYAPALNPPKYETVVTNGSADSTGQSYGQPPPYPVT TGTETHGQQDDHVTHDTAKLVKD |