Gene
| Gene Model ID | pfu_aug1.0_33.1_43426 |
|---|---|
| Locus | scaffold33.1 : 83087 ... 86355 : - |
| To GenomeBrowser | scaffold33.1:83087..86355 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug2.0_1359.1_31635 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_33.1_43426.t1 | 2 | 1 | zf-CCHC | 7 | 13 | 1.0e-05 | 25.1 | 0.01 | 11.0 | 6.1 |
| pfu_aug1.0_33.1_43426.t1 | 2 | 2 | zf-CCHC | 28 | 44 | 1.0e-05 | 25.1 | 4.2e-08 | 4.5e-05 | 23.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 2 |
| trochophore | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_33.1_43426.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43426.t1 atggaattacaccaaactcagtgttatcgatgtggagaaaacttcggacgcggccatcttggagtctgcaaaggaatgaa tagatgttgctttaactgcaagaagacgggtcatctatcgaaaatgtgcaaaatcgccaagcagtcatcagtgagcgtga tccgagtggtagcgcgcaagtcagagaagaagaaggacatagataatcgacgatggacggagtttcattcaaggagacaa catcaagcggaacttccgttcagtggcctaatggagccagaattccttgctctggagctgtccgatccgacaccgattcc tttttacctgaaacccaagcacacatcggtagcagagaaggtaacccaattcactgaaaatattcaaaaactccaaacga gaaatgatgaacatttggcgaaaattgacatctatcaaaagaaaaatgaatcacttgaaaagaaaattcggacattgagc gacaaaatactcttctttgaggccgagttaccgttgacgcaaagacttgtagataggaaaaatgaaatgataacaatgtg gcggtttcaaaatgatatagtgagtgagacgttatccgaatccgaagatgaagaagtcaaattgaagaaaattattgaag atttgaagaacactctatcagataaagacaaagaaatcgaatccctaagaaaatcacattttaaaccaggcgtgcctaaa tccaacccaaacccgtcaactcgtcaaaccgtaaacgcctcaaattataagggttatcaatctaggaaccgcggaggaaa gaagaaccgagtccagaatcaccaacgcccggtggaaacacaaatttttttctgcggccacaaaccagtcatggtatttt gccgccaataa |
|
Protein
| Protein ID | pfu_aug1.0_33.1_43426.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33.1_43426.t1 MELHQTQCYRCGENFGRGHLGVCKGMNRCCFNCKKTGHLSKMCKIAKQSSVSVIRVVARKSEKKKDIDNRRWTEFHSRRQ HQAELPFSGLMEPEFLALELSDPTPIPFYLKPKHTSVAEKVTQFTENIQKLQTRNDEHLAKIDIYQKKNESLEKKIRTLS DKILFFEAELPLTQRLVDRKNEMITMWRFQNDIVSETLSESEDEEVKLKKIIEDLKNTLSDKDKEIESLRKSHFKPGVPK SNPNPSTRQTVNASNYKGYQSRNRGGKKNRVQNHQRPVETQIFFCGHKPVMVFCRQ |
|