Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3307.1_01413
Locus scaffold3307.1 : 301 ... 33995 : -
To GenomeBrowser scaffold3307.1:301..33995
Genes list of scaffold scaffold3307.1
Synonym pfu_aug2.0_509.1_30838

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3307.1_01413.t1
Definition-
>pfu_aug1.0_3307.1_01413.t1
atggataccaaaagttttcaccttgtgatcttgacattggagaattcctactcggtcattaattttcaatgaccagaaag
aagacctcgaagtcatggtattcgtaaatacaatatgcctgagatacttagtttcttcttcgatgacttggattcatttt
tgaatgagcctctaggcctgcatcatattcgtaccaaattatactctgttcctgtacggaacttacacgaaatcgacgaa
tctaaggacctcacatttaccgatataccagggggttgccatggaaacgatcgaaaaacacatagccgaaatgagtttat
ttttgagtacattctgaaaactgattctacagaccctgcggaagattatggtacccgtgaaaaaaagtactcaagggggc
gcattgggggtccccctggctccccgactataaaatttcatggaactgatacgacggatgttgcatgcaagcagtcgacg
ctgaatgtccacgggtaccttgcctcacttcggaatactgtttatttcggggatcgcaactgttccaatagaatttctat
ttattttgccctaccctctagactttcggacttagtaactgatgggctcgtcttcggtgtttatttattatattttgctc
cgatcgtagttcttgctgctgctgcttcagttataatttggatctttgtcaataattttgtacatgttatcaacgacaat
caagaaggttgcgaaacagagatggttcacttcaattcgattttcaaatcaacatgcagatacaaatcttctacattatc
aaaagttgaaataatccaacttaaaaaacaatatggcagtccagacatttttgtcaacccatacaagagtagtttggaga
aagagaaaatccctcaaagcaacgcgaatcagactaaaagtacatattggcgatttgctcaccgaaaagtcgacagggaa
atggtagaattctactttacaaagaacgtgacagactgtaacatgattggccctcacgaagtaattctactcagtgctga
tgcaaaacaacacgaaaagtcatcctttgatctgaatattaccgatgattttgcaacccactccattataactgcttaca
tcgatgaagatttgacgataccgtctgtagagatgcattgtaaaggagttctttattgcaaagatttcctcttctacaaa
gcaaataaagcaacaggaacggataatccaagacaacatgaaaacatgttttgtaccctgaacaaaacaaagtctggtgt
ggtcaggacgatatgcaccagtaaatggacggatccgaaaatgctcaacaatgcagaaactgctctgcaatgtgtcccaa
atgttccatcaaaagtgaacaccaataacaatacttcagaataccctcctaaaaagataaaagggtcttggaaagtgggt
gtggtcatgttcatcaatatgattctatgtaaacttgtgaagactgattctcagaatgtattatttatgaaaagttatgg
aacacaaatgcttcactttggaaaatttaatcgaacaaccaagagcacttcagtcttggcagcgacttctggttacataa
ttcaacagatttgtgagcgtcaattgaatgcagggtatggggataatcacacttactattgtagaaagaaagtaggtgct
atgggcgaagctttgatagtagaacttcgaaaagacaatcaccagatagcaacaataaacgtctcgatggatggtaaatc
tcaaaatacatcaaagggaagagtccaatttgaaggacaaatggacgggaatattttggttatgaatgtcacattcagca
aggtgtaccattgtgacaaaggactatatacaataaaaatcaccaatgagagtgacatcgaattcaaccttattcaaaaa
gagtttggaagtacacatagctgtagaaaacaacaggagcttcagattccatggcaacattcaaagacatacatctgtca
gttctgttcggagaaagatgttgatttacagtttgagtatatcgtgaaaactgattttataacaactgcaattccttcaa
gaagagtaaatataactaaagagtttgaaaatggattggttcagctaaaattcttcataaagaacatgacgtgtgaaaca
tacatgaaagtgtatgttgtcggcgaaatgaacagggcaatatttcaaaaaatattgaccgataaacggtacatcgtttg
tgacgtcacgtcattgatgacgcttaaccatggcaatattaagaacaacggttatgctataattggtatattacgagtct
atcttaaacttgttggacaaaaaagtggatag

Protein
Protein IDpfu_aug1.0_3307.1_01413.t1
Definition-
>pfu_aug1.0_3307.1_01413.t1
MDTKSFHLVILTLENSYSVINFQXPERRPRSHGIRKYNMPEILSFFFDDLDSFLNEPLGLHHIRTKLYSVPVRNLHEIDE
SKDLTFTDIPGGCHGNDRKTHSRNEFIFEYILKTDSTDPAEDYGTREKKYSRGRIGGPPGSPTIKFHGTDTTDVACKQST
LNVHGYLASLRNTVYFGDRNCSNRISIYFALPSRLSDLVTDGLVFGVYLLYFAPIVVLAAAASVIIWIFVNNFVHVINDN
QEGCETEMVHFNSIFKSTCRYKSSTLSKVEIIQLKKQYGSPDIFVNPYKSSLEKEKIPQSNANQTKSTYWRFAHRKVDRE
MVEFYFTKNVTDCNMIGPHEVILLSADAKQHEKSSFDLNITDDFATHSIITAYIDEDLTIPSVEMHCKGVLYCKDFLFYK
ANKATGTDNPRQHENMFCTLNKTKSGVVRTICTSKWTDPKMLNNAETALQCVPNVPSKVNTNNNTSEYPPKKIKGSWKVG
VVMFINMILCKLVKTDSQNVLFMKSYGTQMLHFGKFNRTTKSTSVLAATSGYIIQQICERQLNAGYGDNHTYYCRKKVGA
MGEALIVELRKDNHQIATINVSMDGKSQNTSKGRVQFEGQMDGNILVMNVTFSKVYHCDKGLYTIKITNESDIEFNLIQK
EFGSTHSCRKQQELQIPWQHSKTYICQFCSEKDVDLQFEYIVKTDFITTAIPSRRVNITKEFENGLVQLKFFIKNMTCET
YMKVYVVGEMNRAIFQKILTDKRYIVCDVTSLMTLNHGNIKNNGYAIIGILRVYLKLVGQKSG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495