Gene
| Gene Model ID | pfu_aug1.0_33075.1_26626 |
|---|---|
| Locus | scaffold33075.1 : 1 ... 16133 : + |
| To GenomeBrowser | scaffold33075.1:1..16133 |
| Genes list of scaffold | scaffold33075.1 |
| Synonym | pfu_aug2.0_1437.1_24920 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | hypothetical protein |
| Description | Similar (33%) to XP_787561.2| PREDICTED: similar to G protein-coupled receptor 54 [Strongylocentrotus purpuratus |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_33075.1_26626.t1 | 1 | 1 | 7tm_1 | 35 | 151 | 4.3e-26 | 91.6 | 2.7e-29 | 5.8e-26 | 91.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_33075.1_26626.t1 | gi|260814825|ref|XP_002602114.1| | hypothetical protein BRAFLDRAFT_236117 [Branchiostoma floridae] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_33075.1_26626.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33075.1_26626.t1 tcgcaaaaacggccaacgacacttggctatttggttggttgggatgcgttggccgcagttccttccgggacccaaattca gaatattgccggctcgaatcgtccacgctgcatgccacttgtctcacattgaccgccatgacggccgaccgttaccaggc tatcgtgtatcccatacagtcaatgaactggcgatcaacacgtgcttcaacatttgtctgtatcggtgtatggattgctt ccttcctcttgtcgctccccttcgccctctaccatgaggtacaatcccaaggaggaggtctgatctgcaccaccaactgg ccccaccctgagtgggacaagtggttccatctgggcgtggtcctaactacgttcgttttcccgctaactgccatcgtcat ctgctacgtccagatcctccatcacttgtggcgtgggagcaaagtcaaaaggaatcagagaaatgtg |
|
Protein
| Protein ID | pfu_aug1.0_33075.1_26626.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33075.1_26626.t1 AKTANDTWLFGWLGCVGRSSFRDPNSEYCRLESSTLHATCLTLTAMTADRYQAIVYPIQSMNWRSTRASTFVCIGVWIAS FLLSLPFALYHEVQSQGGGLICTTNWPHPEWDKWFHLGVVLTTFVFPLTAIVICYVQILHHLWRGSKVKRNQRNV |
|