Gene
Gene Model ID | pfu_aug1.0_33075.1_26626 |
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Locus | scaffold33075.1 : 1 ... 16133 : + |
To GenomeBrowser | scaffold33075.1:1..16133 |
Genes list of scaffold | scaffold33075.1 |
Synonym | pfu_aug2.0_1437.1_24920 |
Manual annotation
Study field | Environmental Response |
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Gene name | hypothetical protein |
Description | Similar (33%) to XP_787561.2| PREDICTED: similar to G protein-coupled receptor 54 [Strongylocentrotus purpuratus |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_33075.1_26626.t1 | 1 | 1 | 7tm_1 | 35 | 151 | 4.3e-26 | 91.6 | 2.7e-29 | 5.8e-26 | 91.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_33075.1_26626.t1 | gi|260814825|ref|XP_002602114.1| | hypothetical protein BRAFLDRAFT_236117 [Branchiostoma floridae] | 1.0e-16 |
Transcript
Transcript ID | pfu_aug1.0_33075.1_26626.t1 |
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Definition | - |
>pfu_aug1.0_33075.1_26626.t1 tcgcaaaaacggccaacgacacttggctatttggttggttgggatgcgttggccgcagttccttccgggacccaaattca gaatattgccggctcgaatcgtccacgctgcatgccacttgtctcacattgaccgccatgacggccgaccgttaccaggc tatcgtgtatcccatacagtcaatgaactggcgatcaacacgtgcttcaacatttgtctgtatcggtgtatggattgctt ccttcctcttgtcgctccccttcgccctctaccatgaggtacaatcccaaggaggaggtctgatctgcaccaccaactgg ccccaccctgagtgggacaagtggttccatctgggcgtggtcctaactacgttcgttttcccgctaactgccatcgtcat ctgctacgtccagatcctccatcacttgtggcgtgggagcaaagtcaaaaggaatcagagaaatgtg |
Protein
Protein ID | pfu_aug1.0_33075.1_26626.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33075.1_26626.t1 AKTANDTWLFGWLGCVGRSSFRDPNSEYCRLESSTLHATCLTLTAMTADRYQAIVYPIQSMNWRSTRASTFVCIGVWIAS FLLSLPFALYHEVQSQGGGLICTTNWPHPEWDKWFHLGVVLTTFVFPLTAIVICYVQILHHLWRGSKVKRNQRNV |