Gene
| Gene Model ID | pfu_aug1.0_331.1_07481 |
|---|---|
| Locus | scaffold331.1 : 1 ... 11645 : - |
| To GenomeBrowser | scaffold331.1:1..11645 |
| Genes list of scaffold | scaffold331.1 |
| Synonym | pfu_aug2.0_60.1_00145 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_331.1_07481.t2 | 1 | 1 | V-SNARE_C | 113 | 172 | 1.3e-17 | 63.5 | 4.1e-21 | 3.0e-17 | 62.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_331.1_07481.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_331.1_07481.t1 atgccctatttcttccgcatgatggtacagagtgatttaggtcgactagaaagagccactggtaaagatgttcatttatt tgaaaatgaaattcaggcaaaaattgacattgttgtcagcaattgtgaacgactcagtattcttgtgaataaggaaccac cagctagacgggctaatgccaagttacgaactgaccagctgaaatatgattgccaacatattcaggcagcccttcgtcat attcagcacaagaggtatgtgaaagaagaggaagaaagagaaagggacgaattattgacacgtaaatttgtgccaaatga tcaggacacttctatacagatggatgctggactggcccatcattccagacttcacgattcacacagagaaattgataaca taatagacacaggttctaacgtatttgataacttacgacagcagcggatgaccttgaagggagctcataaaaaggtgtta gatttggcaaatacactcggactctcaaataccgtcatgagaatgattgaaaaacgtacatatcaggataaatacatttt atttggtggtatgattgtaacaggcgtcataatgttccttatatggaaatattttacttga |
|
| Transcript ID | pfu_aug1.0_331.1_07481.t2 |
| Definition | - |
>pfu_aug1.0_331.1_07481.t2 atggtacagagtgatttaggtcgactagaaagagccactggtaaagatgttcatttatttgaaaatgaaattcaggcaaa aattgacattgttgtcagcaattgtgaacgactcagtattcttgtgaataaggaaccaccagctagacgggctaatgcca agttacgaactgaccagctgaaatatgattgccaacatattcaggcagcccttcgtcatattcagcacaagaggtatgtg aaagaagaggaagaaagagaaagggacgaattattgacacgtaaatttgtgccaaatgatcaggacacttctatacagat ggatgctggactggcccatcattccagacttcacgattcacacagagaaattgataacataatagacacaggttctaacg tatttgataacttacgacagcagcggatgaccttgaagggagctcataaaaaggtgttagatttggcaaatacactcgga ctctcaaataccgtcatgagaatgattgaaaaacgtacatatcaggataaatacattttatttggtggtatgattgtaac aggcgtcataatgttccttatatggaaatattttacttga |
|
Protein
| Protein ID | pfu_aug1.0_331.1_07481.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_331.1_07481.t1 MPYFFRMMVQSDLGRLERATGKDVHLFENEIQAKIDIVVSNCERLSILVNKEPPARRANAKLRTDQLKYDCQHIQAALRH IQHKRYVKEEEERERDELLTRKFVPNDQDTSIQMDAGLAHHSRLHDSHREIDNIIDTGSNVFDNLRQQRMTLKGAHKKVL DLANTLGLSNTVMRMIEKRTYQDKYILFGGMIVTGVIMFLIWKYFT |
|
| Protein ID | pfu_aug1.0_331.1_07481.t2 |
| Definition | - |
>pfu_aug1.0_331.1_07481.t2 MVQSDLGRLERATGKDVHLFENEIQAKIDIVVSNCERLSILVNKEPPARRANAKLRTDQLKYDCQHIQAALRHIQHKRYV KEEEERERDELLTRKFVPNDQDTSIQMDAGLAHHSRLHDSHREIDNIIDTGSNVFDNLRQQRMTLKGAHKKVLDLANTLG LSNTVMRMIEKRTYQDKYILFGGMIVTGVIMFLIWKYFT |
|