Gene
| Gene Model ID | pfu_aug1.0_3310.1_44645 |
|---|---|
| Locus | scaffold3310.1 : 19990 ... 27185 : - |
| To GenomeBrowser | scaffold3310.1:19990..27185 |
| Genes list of scaffold | scaffold3310.1 |
| Synonym | pfu_aug2.0_240.1_00481 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3310.1_44645.t1 | 1 | 1 | Kazal_1 | 115 | 158 | 2.8e-09 | 36.8 | 3.7e-13 | 2.8e-09 | 36.8 |
| pfu_aug1.0_3310.1_44645.t1 | 1 | 1 | Kazal_2 | 121 | 158 | 8.2e-10 | 38.4 | 1.1e-13 | 8.2e-10 | 38.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3310.1_44645.t1 | gi|83318955|emb|CAJ38815.1| | hypothetical protein [Platynereis dumerilii] | 3.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3310.1_44645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3310.1_44645.t1 atggagacaaaatgtattttatcatttatatggatacctatattccttcctggtacgctgggatactccgtggacagtag cggtctacagtattacaatacaaactcggatccatgtcccaatgagtgcgatcctaagaaatgttccaaattgtcctact gtaattctaagatagaaaaagacaggtgtaattgctgtgacgtatgtgcgtccgacgtgtggtcaccggacagctataga cccccattgaagaaaggtggtgcgtgcgagcaggtcaaatgtccaaaacggaaagtatgcgtggaaaacatgcaaggact tccgttgtgcacttgtcccaatgcgttcatctgccgcggaaggaaacgccaggtttgcgggatggacggcaacacatata aatcgaagtgccatatgcgcgtcgcatcatgtgccaaaggcaaacgcataaaactcaagcacaaaggagcatgtaacact ggcatgattgccacccaacaatacggcgggaaagtgaagtatccggatggagaatacgatatccggcgcaggcgcaagaa gaaccgaaagaaggagaaacggaagcataggcgacataaatcacgacttcgtagaaagagaaaacaaaagaaaagggcat accttaggggacgcaaacaaacaagttggcgatatgggaataaagaaaaaaataaactaaataaaagaaaaaataagaag aggaatagacgcaataaacgagtactagttaaaaattag |
|
Protein
| Protein ID | pfu_aug1.0_3310.1_44645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3310.1_44645.t1 METKCILSFIWIPIFLPGTLGYSVDSSGLQYYNTNSDPCPNECDPKKCSKLSYCNSKIEKDRCNCCDVCASDVWSPDSYR PPLKKGGACEQVKCPKRKVCVENMQGLPLCTCPNAFICRGRKRQVCGMDGNTYKSKCHMRVASCAKGKRIKLKHKGACNT GMIATQQYGGKVKYPDGEYDIRRRRKKNRKKEKRKHRRHKSRLRRKRKQKKRAYLRGRKQTSWRYGNKEKNKLNKRKNKK RNRRNKRVLVKN |
|