Gene
| Gene Model ID | pfu_aug1.0_3312.1_01414 |
|---|---|
| Locus | scaffold3312.1 : 264 ... 16365 : - |
| To GenomeBrowser | scaffold3312.1:264..16365 |
| Genes list of scaffold | scaffold3312.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3312.1_01414.t1 | 5 | 1 | LRR_5 | 102 | 123 | 6.5e-11 | 42.0 | 0.83 | 1800.0 | -1.4 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 2 | LRR_5 | 154 | 190 | 6.5e-11 | 42.0 | 0.13 | 280.0 | 1.2 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 3 | LRR_5 | 189 | 237 | 6.5e-11 | 42.0 | 0.23 | 490.0 | 0.3 |
| pfu_aug1.0_3312.1_01414.t1 | 4 | 1 | LRR_8 | 203 | 242 | 2.0e-29 | 101.1 | 2.6e-08 | 5.4e-05 | 22.8 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 1 | LRR_1 | 209 | 227 | 5.3e-11 | 40.9 | 0.00045 | 0.95 | 9.7 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 1 | LRR_7 | 209 | 222 | 9.2e-07 | 28.0 | 0.052 | 110.0 | 3.7 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 1 | LRR_4 | 211 | 243 | 5.4e-20 | 70.5 | 1.1e-07 | 0.00024 | 20.6 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 2 | LRR_7 | 230 | 244 | 9.2e-07 | 28.0 | 0.00055 | 1.2 | 9.6 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 2 | LRR_1 | 231 | 244 | 5.3e-11 | 40.9 | 0.00035 | 0.74 | 10.0 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 2 | LRR_4 | 315 | 350 | 5.4e-20 | 70.5 | 0.00027 | 0.57 | 9.8 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 4 | LRR_5 | 335 | 450 | 6.5e-11 | 42.0 | 1.9e-07 | 0.00041 | 20.0 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 3 | LRR_4 | 357 | 396 | 5.4e-20 | 70.5 | 4.2e-06 | 0.0089 | 15.6 |
| pfu_aug1.0_3312.1_01414.t1 | 4 | 2 | LRR_8 | 357 | 401 | 2.0e-29 | 101.1 | 1.4e-08 | 3.0e-05 | 23.6 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 3 | LRR_1 | 382 | 401 | 5.3e-11 | 40.9 | 5.9e-05 | 0.12 | 12.4 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 3 | LRR_7 | 382 | 395 | 9.2e-07 | 28.0 | 0.0037 | 7.9 | 7.1 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 5 | LRR_5 | 394 | 505 | 6.5e-11 | 42.0 | 1.6e-11 | 3.5e-08 | 33.2 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 4 | LRR_1 | 406 | 427 | 5.3e-11 | 40.9 | 0.01 | 22.0 | 5.5 |
| pfu_aug1.0_3312.1_01414.t1 | 4 | 3 | LRR_8 | 406 | 464 | 2.0e-29 | 101.1 | 3.5e-15 | 7.4e-12 | 44.8 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 4 | LRR_4 | 408 | 444 | 5.4e-20 | 70.5 | 1.2e-06 | 0.0026 | 17.3 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 4 | LRR_7 | 429 | 444 | 9.2e-07 | 28.0 | 0.013 | 28.0 | 5.5 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 5 | LRR_1 | 430 | 449 | 5.3e-11 | 40.9 | 0.001 | 2.1 | 8.6 |
| pfu_aug1.0_3312.1_01414.t1 | 4 | 4 | LRR_8 | 430 | 488 | 2.0e-29 | 101.1 | 2.2e-17 | 4.7e-14 | 51.8 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 5 | LRR_7 | 453 | 465 | 9.2e-07 | 28.0 | 0.046 | 97.0 | 3.8 |
| pfu_aug1.0_3312.1_01414.t1 | 5 | 5 | LRR_4 | 454 | 489 | 5.4e-20 | 70.5 | 9.2e-09 | 2.0e-05 | 24.1 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 6 | LRR_1 | 454 | 475 | 5.3e-11 | 40.9 | 5.5e-05 | 0.12 | 12.5 |
| pfu_aug1.0_3312.1_01414.t1 | 7 | 7 | LRR_1 | 477 | 488 | 5.3e-11 | 40.9 | 0.012 | 25.0 | 5.4 |
| pfu_aug1.0_3312.1_01414.t1 | 6 | 6 | LRR_7 | 477 | 488 | 9.2e-07 | 28.0 | 0.016 | 34.0 | 5.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3312.1_01414.t1 | gi|351701736|gb|EHB04655.1| | Relaxin receptor 2, partial [Heterocephalus glaber] | 9.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_3312.1_01414.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3312.1_01414.t1 atgcttggcgaagccgccgtacggaaattaccgactttatgtataacatctgcacctatttgggatccgctggtcgataa aggacatggtccgctgccncgtattcatatggacgtcaaaggagcatctctttttagggttgtcaccgtgacgttgcgat atgagcggtttgctttgtatgctaggcgaagccgccgaaatgactgcagtagaagtgaagtgaaatgtaaaggctctgga aaatgtatgccaagggtttatcctttgtcgatgcaaaaagaatgcttaggtggtgcacagacatcatttccgtacaattt gacaaggacaaaatgtccatcattctacatctgcaaacaaaccaaacgtgatatatctcgtaacaatggaacaatatgcc taagtcagaaagagatatgtgatggtataccgcagtgtccatattgggacgatgagacctcatgttcacatgtttattgt cctcaagggtgcacaagatgctcggataatagatacaagtgttcatcgagcgctttgttggacattccaagcagtgcagt cagcatcgatgtttcaggccaagatgttgatctgagggatgtttgtttcatcaaacgtctacgattactatcattgaact tatctcactgcaatttatcagaaatacgctgcgtcacattcaaatttccgaatcttcgttatttagatgtttcttacaac aacttagaaaccccattttttacaccccaagacagactaaatctaagattagacggcaatccaataaatgctttaatttt tcaatgccttaaaccgattcgtcatatgtcggtaaagaatgcacgagttcgaacattctatactacgtggaaatctggat attttcaaatgcatttccgtaataactcacttctacaagaatcggagcttaatgagtacatggaaagtgtcgattttgga gaaaatgaaatagaatctgtatcttttttggacaaattctttaatctcctttctgcaaatgtatcaaaaaataaaataag ttatttaaagaatcggttcttcttacgaaaactaactaggttcatagcaaacgataatttgttgactaaactaacaaact tatcatttgaatatgtgagagatctggaagtacttgacctcagtagaaaccgcatccgtagtatagcatcagatatattt aaaacaaatttattgttaagtgaggtgtatttacaaaataatctcttgaaaagattatctccgtcattgtttaaacatct taattacctcgaggtattacgtttagacgacaattatattgaaaacttaccatccgaaatgttttataatcaagttgcat tgagaacattgaatttaaaaaataacaatataaagttgatacccaaaagattgttccgtcacttggcatctttaagattt ttagacattagtggaaatgatatctatgtttacgagaacatattctatggccttgttcttaaaactttaatcgtcgataa gttttcgctttgctgtgcaaaaccacgaagtgtcactgtagacaactgtcatgcaccaagcgtttcagtatcgtcctgtc cgtatttcctgaaatcatggcctctcggtgtatgcttttggtatctaacaattttactttttgctggaaacctattcata ataaagggtcatcttaaagaaaaagacacatccaatatgtggaagaaaacctttcttgtgaatatgtccattgcggatat tatgatagggttttacatcttcagccttggtctaaaagatgttgtaaataaaggacaatatggatttgatcatgatgaat ggatacagacgtggcgatgcgacgctctacagcttctgttatccacatccattgaggcaacagtgatccttaccgtaatt gcatgcatccagaatcttaatcctttgtgtgaccttgacagaacaaagctgaacatacttatgctagtagcatgggtatt aagcattgcccttgctgctgcatatttctcttggaataaatcaaccagccatggagtatcgatgagcccccaactttgta tggttataccaataatttatcattttcaagaaaactatactaatggcagccaatattggacatggatattcgtctggttg atctcccatttttcctgttccctgatgatatcatctacagaaatctttcgtacgtttagaggtccccaaaggaaaagaga tgtacaacagacaatcatcttcacatctatcactgttcgagatctgttcatctgtattacagaactgaactttgaaatca aagagatcattctaataagaaactcatccaagaaaacatctggaaaatcaggttcattgaagacgattatcgtatttgat ccattgttgaaacccaaaatcaaaagtggaattcgtttgaatgtcgaaagacgtcgtttagatatacgtgcaaaccagtg tagttctatgtatacctatgaagtacggtctatgcgtagctag |
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Protein
| Protein ID | pfu_aug1.0_3312.1_01414.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3312.1_01414.t1 MLGEAAVRKLPTLCITSAPIWDPLVDKGHGPLXRIHMDVKGASLFRVVTVTLRYERFALYARRSRRNDCSRSEVKCKGSG KCMPRVYPLSMQKECLGGAQTSFPYNLTRTKCPSFYICKQTKRDISRNNGTICLSQKEICDGIPQCPYWDDETSCSHVYC PQGCTRCSDNRYKCSSSALLDIPSSAVSIDVSGQDVDLRDVCFIKRLRLLSLNLSHCNLSEIRCVTFKFPNLRYLDVSYN NLETPFFTPQDRLNLRLDGNPINALIFQCLKPIRHMSVKNARVRTFYTTWKSGYFQMHFRNNSLLQESELNEYMESVDFG ENEIESVSFLDKFFNLLSANVSKNKISYLKNRFFLRKLTRFIANDNLLTKLTNLSFEYVRDLEVLDLSRNRIRSIASDIF KTNLLLSEVYLQNNLLKRLSPSLFKHLNYLEVLRLDDNYIENLPSEMFYNQVALRTLNLKNNNIKLIPKRLFRHLASLRF LDISGNDIYVYENIFYGLVLKTLIVDKFSLCCAKPRSVTVDNCHAPSVSVSSCPYFLKSWPLGVCFWYLTILLFAGNLFI IKGHLKEKDTSNMWKKTFLVNMSIADIMIGFYIFSLGLKDVVNKGQYGFDHDEWIQTWRCDALQLLLSTSIEATVILTVI ACIQNLNPLCDLDRTKLNILMLVAWVLSIALAAAYFSWNKSTSHGVSMSPQLCMVIPIIYHFQENYTNGSQYWTWIFVWL ISHFSCSLMISSTEIFRTFRGPQRKRDVQQTIIFTSITVRDLFICITELNFEIKEIILIRNSSKKTSGKSGSLKTIIVFD PLLKPKIKSGIRLNVERRRLDIRANQCSSMYTYEVRSMRS |
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