Gene
| Gene Model ID | pfu_aug1.0_3313.1_30385 |
|---|---|
| Locus | scaffold3313.1 : 18536 ... 25266 : + |
| To GenomeBrowser | scaffold3313.1:18536..25266 |
| Genes list of scaffold | scaffold3313.1 |
| Synonym | pfu_aug2.0_1022.1_08104 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3313.1_30385.t1 | 1 | 1 | Beta-lactamase | 68 | 308 | 5.0e-16 | 58.6 | 1.1e-19 | 8.2e-16 | 57.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3313.1_30385.t1 | gi|260799523|ref|XP_002594745.1| | hypothetical protein BRAFLDRAFT_81212 [Branchiostoma floridae] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug1.0_3313.1_30385.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3313.1_30385.t1 atgactgtattctttgttgtggaatattctctgtgtttcttacttattattatcgtcaggatcttctttaaattatttgt gtcacacttatgccctttgccgtgtggagctcgtaaaaaagttccccgcgaggggtttggcactgatattctcggagatt cgttcagatttgccgattcagaaaggaatttgtacgcggggatccgtgatctactggctcatactcttggcatagcaaat cataattggatgaggtttgacgatacgatcacgaggcaaaatatcgtagatcgtattcagcattttgacgagatagcgcc attcaggacaaagtttctcaccaacaacttgatgtacggagtcataacaagaattacagaggtgctcggcaagtcatcgt gggagaatttgattagaaaaatgatttacgacaaaataggtatgacgacatcagacctgcttaccacggtcaaccctttg acgaaagatgtcgccactggttacagcagcgacgacgaagacggagggataatagaatctccattctccttgaacgaaca ctggggagccctgtgtggatctacttgtataatgagcaatgctgtagacatggctaagtggatgcacctccatctaagtg gtggtcaaacactctctggtcagcaggtttacgacaaagctttcttggcaaggtgttatgagccgcataacgtggcagta tcatccacgtacgccagatacttcagcaaaccaaatgccccagtttctaacactgtctctaactacggatttggctggca aaatggacattaccgaggttggcccatactgacccatacgggaacaacatggggatatgtctcaaaaataactcttatcc cggataagaagattgggatcttcacagcaatgaacggtcttgatgaccactacctttaccgtacactcctccacaattac ctggctgacctgtacatagggacacaaccctatcttaatgcaagcactatctgttcctatccgaaaccattcttcgacga tcccaaactcagaccggaatatggcgggaatagaccgtccgtcgataagaacgtacctccaactcattcactgagaactt acgtaggtgcctacaagaattctccatacggaactgtccatgtggcaattgacgcagccaagaacaggcttacactgacg tacggggtaggatcttggtacttgtatccaaagcggggtaaaacggacgaattctcagcggaagggaaaggaattcttta caaattgttctatatggacacagtaacattcaaaatcataggcggcgtttcccactcaataatcttaaatgaatttgaaa gacgggatccaccagaatttgtaattattcatgctggtattgttggataa |
|
Protein
| Protein ID | pfu_aug1.0_3313.1_30385.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3313.1_30385.t1 MTVFFVVEYSLCFLLIIIVRIFFKLFVSHLCPLPCGARKKVPREGFGTDILGDSFRFADSERNLYAGIRDLLAHTLGIAN HNWMRFDDTITRQNIVDRIQHFDEIAPFRTKFLTNNLMYGVITRITEVLGKSSWENLIRKMIYDKIGMTTSDLLTTVNPL TKDVATGYSSDDEDGGIIESPFSLNEHWGALCGSTCIMSNAVDMAKWMHLHLSGGQTLSGQQVYDKAFLARCYEPHNVAV SSTYARYFSKPNAPVSNTVSNYGFGWQNGHYRGWPILTHTGTTWGYVSKITLIPDKKIGIFTAMNGLDDHYLYRTLLHNY LADLYIGTQPYLNASTICSYPKPFFDDPKLRPEYGGNRPSVDKNVPPTHSLRTYVGAYKNSPYGTVHVAIDAAKNRLTLT YGVGSWYLYPKRGKTDEFSAEGKGILYKLFYMDTVTFKIIGGVSHSIILNEFERRDPPEFVIIHAGIVG |
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