Gene
Gene Model ID | pfu_aug1.0_33202.1_48108 |
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Locus | scaffold33202.1 : 106 ... 3917 : + |
To GenomeBrowser | scaffold33202.1:106..3917 |
Genes list of scaffold | scaffold33202.1 |
Synonym | pfu_aug2.0_3060.1_02320 |
Manual annotation
Study field | Metabolism |
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Gene name | amylase-like |
Description | best hit to Pinctada maxima amylase [HM989014.1] |
mRNA evidence |
Study field | Metabolism |
---|---|
Gene name | amylase-like |
Description | best hit to Pinctada maxima amylase [HM989014.1] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_33202.1_48108.t1 | 1 | 1 | Alpha-amylase | 43 | 149 | 3.3e-07 | 30.0 | 6.0e-11 | 4.5e-07 | 29.5 |
pfu_aug1.0_33202.1_48108.t1 | 1 | 1 | Alpha-amylase_C | 229 | 311 | 1.5e-13 | 50.6 | 4.4e-17 | 3.3e-13 | 49.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_33202.1_48108.t1 | gi|344240506|gb|EGV96609.1| | Pancreatic alpha-amylase [Cricetulus griseus] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_33202.1_48108.t1 |
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Definition | - |
>pfu_aug1.0_33202.1_48108.t1 atgactggcgggggaagtggatcaggaaccggaggcagccgttacgatggcgggagtctatcttaccctggtgtgccatt ttcatcgtgggatttcaacgcagggtccgagtgtcactccggagatggcgatattcataactacaacgaccctaacgaag tgcgcaactgtcgcctggtcagcttaagggatctcaaaatgtcaaaagattacgtcagagacaaagttgcagactacatg aacaatttgataaacattggtgtcgccggcttccgtgtagacgcagcaaaacacatgtggcccggagatctgagagcggt cttcggaaagcttcacaatttgaatacaaaatacttcaatagtggtcaaaagccgttcatattccaagaagtaatagaca tgggtggagaggcaatcaaagcagctgagtatacaccaatcgctagagttacaaatttcatatacggcataaagatagca gatgtcttcagaaacattgtgaacggtgaggataagaacaactggtacggtccaccacataacggtgatatgagtatcaa ggggagatcaatcaaagccgacctttcctgtggaaatggatggacatgtgagcatagatggcgacagatctacaatatgg tggccttcaggaaccttgtgtttggaaccactgtcaacaactggtgggataatggaaacaaagctatcgctttctccaga gggaaccgtggctttattgtcataaatgatgacacagtagatgtgaatgctaacctacaaacaggactcccgcagggaac ttattgtgatgtcatatccggaaattatgagaacggcgcatgtaccggaaatgaggtacatgttggtggagatgggcgtg cccatttccatatcagtcaccagagtgaggatccagttgtggcaatacatataggtgcaaagaaaggaagtccaaagaaa gtcatcctttaa |
Protein
Protein ID | pfu_aug1.0_33202.1_48108.t1 |
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Definition | - |
>pfu_aug1.0_33202.1_48108.t1 MTGGGSGSGTGGSRYDGGSLSYPGVPFSSWDFNAGSECHSGDGDIHNYNDPNEVRNCRLVSLRDLKMSKDYVRDKVADYM NNLINIGVAGFRVDAAKHMWPGDLRAVFGKLHNLNTKYFNSGQKPFIFQEVIDMGGEAIKAAEYTPIARVTNFIYGIKIA DVFRNIVNGEDKNNWYGPPHNGDMSIKGRSIKADLSCGNGWTCEHRWRQIYNMVAFRNLVFGTTVNNWWDNGNKAIAFSR GNRGFIVINDDTVDVNANLQTGLPQGTYCDVISGNYENGACTGNEVHVGGDGRAHFHISHQSEDPVVAIHIGAKKGSPKK VIL |